Gene Sros_5788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5788 
Symbol 
ID8669082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6340970 
End bp6342190 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341277 
Protein GI271967081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.414935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0756976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACGA TCTGCCTGGT AGGGACGCTG GATACGAAGG GCCGGGAGTA CGCCTGGCTC 
CGTGACCGCC TGCGCGACCT CGGATGCGAG GTCGTCCTGG TCGACGCGGG GGTGGGCCGG
GCACAGGTGG ACGCCGACGT CGGCAACGAC CGCGTGGCCC GGGCCGCCGG GGCCGAGGTC
GAGGCGCTCC GCGCGGCGGG CGACCGGGGC GCGGCCGTCG CCGCGATGGG CGAGGGCGCG
GCCGCGGTCC TCGCGGAGCT GCACGGCGCG GGCCGGCTCG ACGCCGTGCT CGCCGTCGGC
GGCAGCGGCG GATCCTCGAT CGCGGCGCGG GCCGTACGGG ATCTGCCGAT CGGCCTGCCC
AAGCTCATCG TCTCCACCAT GGCCTCCGGT GACGTCTCCC CCTACGTGGG GGCCAAGGAC
GTGACGCTGA TGTACAGCGT CGTCGACATC GCGGGCGTCA ACCGGCTCTC CCGGCGCATC
CTCGGCAACG CGGCCGCCGC CGTGGCGGGC ATGGCGAGCG TCGCCCTCCC GGCCGGCGCC
GAGGACCGCC CGCTCGTCGC CGCGTCGATG TTCGGCGTGA CCACGCCCGC GGTGGACGCG
GCCAGGGAAC GCCTGGAGGA GCTCGGCTAC GAGGTGCTGG TCTTCCACGC GACCGGATCC
GGCGGCCGGG CGCTGGAGGG GCTCGCCGGC AGCGGGCTGC TCTCGGGAGT CCTCGACCTC
ACCACCACCG AGCTGGCCGA CGACCTGGCC GGCGGCGTGC TGTCGGCCGG TCCGGAGCGG
CTGACCGCGG CCGGCGCGGC CGGCGTGCCC CAGGTGGTCG CCCCGGGCGC ACTGGACATG
GTCAACTTCG GCCCCCGGGA CACCGTGCCC GAACGGTTCG AGGGACGCAC GTTCCACGTG
CACAACCCGG CTGTGACGCT GATGCGGACC ACGGCAGGGG AGATGGGCGA GCTGGGCCGC
CGGGTGGCCG CCAAGCTGCG CGGGGCGACC GGTCCGGCCG CGCTGTTCGT CCCGCGCGGC
GGGGTGTCCG CCCTCGACGC CCCCGGCGCG GCCTTCCACG ACCCGAAGGC CGACGAGGCC
TGTTTCGAGG CCCTGTCGGA CGGCCTGCGC GGTACGGCCG TCGAGGTCGA GGAGCTCGAC
CTGCACGTCA ACGATCCCGG ATTCGGCCGC GCCATGGCCG ACCGGCTGCA CCGGATGATC
TCTTCGGGAG GGGCGAAGTG A
 
Protein sequence
MPTICLVGTL DTKGREYAWL RDRLRDLGCE VVLVDAGVGR AQVDADVGND RVARAAGAEV 
EALRAAGDRG AAVAAMGEGA AAVLAELHGA GRLDAVLAVG GSGGSSIAAR AVRDLPIGLP
KLIVSTMASG DVSPYVGAKD VTLMYSVVDI AGVNRLSRRI LGNAAAAVAG MASVALPAGA
EDRPLVAASM FGVTTPAVDA ARERLEELGY EVLVFHATGS GGRALEGLAG SGLLSGVLDL
TTTELADDLA GGVLSAGPER LTAAGAAGVP QVVAPGALDM VNFGPRDTVP ERFEGRTFHV
HNPAVTLMRT TAGEMGELGR RVAAKLRGAT GPAALFVPRG GVSALDAPGA AFHDPKADEA
CFEALSDGLR GTAVEVEELD LHVNDPGFGR AMADRLHRMI SSGGAK