Gene Sros_5787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5787 
Symbol 
ID8669081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6340152 
End bp6340973 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_003341276 
Protein GI271967080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.374377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0228612 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCGCC AGGACATCCT TGCCAGGCTC GGGCGGACCG TCGCCGAGGG CCGCCCGGTC 
GTCGGCGCCG GCGCCGGAAC CGGCCTGTCC GCGAAGTGCG CCGAGGCCGG CGGCGTCGAC
ATGATCATCA TCTACAACTC CGGCCGCTAC CGGATGGCAG GCCGCGGCTC GCTGGCGGGA
CTGCTGCCGT ACGGCGACGC CAACCAGATC GTCGTCGAGA TGGCGGCCGA GGTGCTCCCC
GTCGTCGAGG ACACCCCGGT CCTGGCCGGG GTCTGCGGCA CCGACCCGTT CCGGCTGATG
CCCAGGTTCC TCGACCAGCT CGCCGCCATG GGCTTCGCGG GTGTGCAGAA CTTCCCGACC
GTGGGGCTGT ACGACGGGGT CTTCCGCCAG AACCTGGAGG AGACCGGCAT GGGCTACGAC
CTCGAGGTCG AGATGGTCCG GCTGGCCCGC GAGCGCGACC TGCTGACCGC GCCGTACGTC
TTCGACGAGG AGCAGGCGCG AGCGATGGCC GAGGCGGGCG CCGACGTCCT GGTCCCGCAC
GTCGGGCTGA CCACCAAGGG CAGCATCGGC GCGGGGACCG CGCTGACCCT GGACGAGGCC
GTGGAGCGGG TCCAGGCGAT GCGCGACGCG GCGGTCGCCG TCCGGCCCGA CGTCTTCGTG
CTCTGCCACG GCGGCCCGAT CGCCGAGCCC GGGGACGCGG GTTACGTGCT GTCGCGTACC
GAGGGGGTCG TGGGCTTCTT CGGGGCGTCG TCGGTCGAGC GGCTGCCGAC CGAGCGCGCC
ATCACCGAGC AGGTCCGGGC TTTCAAGTCG CTGGAGTTCT GA
 
Protein sequence
MNRQDILARL GRTVAEGRPV VGAGAGTGLS AKCAEAGGVD MIIIYNSGRY RMAGRGSLAG 
LLPYGDANQI VVEMAAEVLP VVEDTPVLAG VCGTDPFRLM PRFLDQLAAM GFAGVQNFPT
VGLYDGVFRQ NLEETGMGYD LEVEMVRLAR ERDLLTAPYV FDEEQARAMA EAGADVLVPH
VGLTTKGSIG AGTALTLDEA VERVQAMRDA AVAVRPDVFV LCHGGPIAEP GDAGYVLSRT
EGVVGFFGAS SVERLPTERA ITEQVRAFKS LEF