Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5782 |
Symbol | |
ID | 8669076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 6330493 |
End bp | 6333804 |
Gene Length | 3312 bp |
Protein Length | 1103 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | ATPase-like protein |
Protein accession | YP_003341271 |
Protein GI | 271967075 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.493959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0341342 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTTTCG GGGTGCTGGG CCCGCTGGAG GTGTGGACGG CTGACGGGCG GGTGGTCAGG GTCCCGGAGC TCAAGGTCCG CGCCCTGCTC GCCGACCTCC TGGTGCACCG CGGGCGGCCG GTGTCCGCGG ACAGGCTGAT CGACGACCTG TGGGGCACCG CGCTGCCGAA CAATCCGCTC GGCACGTTGC AGAACAAGAT CTGGCAGCTG CGGCGCGTGC TTGAGGACGC CGAGCCGGGC GGGCGGGACC TGGTGATGTC CCGCCCGCCC GGATACCAGC TGCTGGTCGA GCCCGACGCG GTGGACGAGG GCCGCTTCCA CGAACTGGCG ACGCGGGCAC GGGCGAGCGG CGACTCCCGG GTGCGTGCCG CCCTGCTGGC GGACGCACTG GCGGTGTGGC GCGGCCCGGC GTTCGCCGAC TTCGCCGACG AGGGGTTCAC CCGGACGGCG ACGGCACGGT TGGAGGAGCA ACGGCTGACC GCGTTGGAGG AGCAGGCCGA GGCGCGGCTG AAACTGGGAG AGCACGCGCT GCTGGCCGAC GAGCTCGGCG ACCTGGTCGC CCTGCATCCG CTCCGGGAAC GGCTGCGCGC CGCCCACGTA CGCGCGCTGT ATCTCGCGGG CCGGCAGAGC GACGCGCTGA ACAGCTATGG CGACCTGCGG GAGCGGCTGG CCGAGAGTCT GGGCCTGGCC CCCGGTCCCG AGCTCGCGGC CCTGCACCAG GCGATCCTGG TCCAGGACCC GGCGCTGACG GCGGTGCCCT CCCCGGCCAC GACCGTGGCC CGCCCGCTGA CGAACGTGCC GAGCGCGCTC ACCGACCTGA TCGGCAGGGC CGAGGCGGTC GGCGAGCTCC GCTCGCTGCT GAAGGCGGGC AGGCTGGTGA CGCTCACCGG CGCGGGCGGG GTCGGCAAGA CCCGGCTCGC GCTGGCGATC GCCGAGCAGG TCGGCCAGTC GTTCCCGGGA GGAGTGCGGC TGGTCGAGTT CGCCGCGCTC GCCCCGTCCT CACGTTCACC GGCCCACCCC CGGGGACGGC GGGAGACGGC TCCGGCGACC GAGGTGCACG ACGTGGTCGG CGAGGTGCTC GGGGTGCGGG ATGTCATGAC GTCGGCCCCC GAGCCCCTCT CGCCGACGGA GCGCATCGTC CACGCGCTGG GGGACCAGCC GACCCTGCTG GTGTTCGACA ACTGCGAGCA TGTGATCGAG CCGGTCGCCG AGCTGGCGGA GCGGTTGCTC AGAGCCGCCC CCCGGCTGCG GATCCTGGCG ACCAGCCAGG AACCGCTGGG CATCACCGGC GAACATCTCC AGGCGGTGCG CCCGCTGCGG CTTCCCGCGC CCGCGACGGA CCTCGGCCCC GCCGCCGCGC GCCGGTTCAG CGCGGTGGAG TTGTTCGTGG CGAGGTCGAG CGCGGCGGCA CCGGGCTTCG TCCTCGACGA GACCAACGTC GAGGCGGTCG TCTCGATCTG CCGGCGGCTG GACGGCATCC CCCTCGCGCT GGAGATGGCC GCCACCCGGG TCCGGGCGCT GGGCGTGCAC GAGGTGGCGG CACGCCTCGA CGATCGCTTC CATCTGCTGG CCGCGGGGGC CCGCGGCGCC CCGGCGCGGC AGCGGACGCT ACGGGCGGTG ATCGACTGGA GCTGGGGCCT GCTCGGCGAG CAGGAGCGTG CGGTGCTCCG GCGGCTGGCC GTGCACCCCG GCGGCTGCAC GCTCGCCGCG GCCGAGGAGG TCTGCGCCGG TGACGACGTG GATCGCACGG AGGTCCTCGA CCTGCTCGCC CGGTTGGTGG ACTGCTCGCT GGTCGTCATG TCCGCCGGCG CGGACGGCCC CCGGTATCGG CTGCTGGAGT CGGTCACGGC CTACTGCGTC GAACGCCTCC GTGAGGCCGG CGAGCTCGAA GAGTTCCGGC TCAGGCACCG CGACTACTAC ACCGACCTGG CCGAACGCGC CGAGCCGCGC CTGCGGGGCC ACGACCAGCG GCTGTGGCTG CGGCGCCTAG ACGCCGAGAC CGCCAACCTG CGTACCGCGC TCGAGGGGGC GGCGCGGCTC GGTGACGCGG ACCGCGCGCT GCGCCTGGCG AACGCGCTGA CGTGGTACTG GTACCTGCGC GGCCGGATCG GCGAGGCCGA GCGGTTCCTG GCCACGGCGC TGTCGGCCGG TGACACGGCC CCCGCCGCCA CGGTGGCCAG GGCCACGGCC TGGCTGGGCG GCCTCAGGCT GCTGCTCGGC GGTAGCGCGG ATCCGGCGGC GGAGTACCGC GCCGCGCTGC GGGCGGCCGA GCGGATCGAC GACCCGGGCG GGCGGGCCCG GATGGAGTGG TTCCTCGGAT CGCACACGTA CGGCATCGGC GATCTGTCGA CGAGTGAGGA CCTGACCGGC CGGGCGTTGG CGACCTTCCG GTCACTCGGG GATCGCTGGG GTATGGCCGC GGCCCTGAAC AACCGCACTT TCCACGCGAA GCTGCGCGGA GACTTCCAGG CGCTGCGGCG GGACGGCGAA CGGAGCCTGG AGCTGTTCCG GGATCTGGGC GACCAGTGGG GGCAGCTCCA GACCGTGACC CCGCTGGCGA CGCTGGCCGA GATCGCCGGC GACTACGGGC AGGCCGGGCG GCTGTACCGG GACGGGCTGC GGATGGCCGA TGACCTCGGG CTGTGGCCCG AGGTCTCCTT CACCCTCTCC GGGCTGGGCC GGATGGCCCT GCTGTCGAAG GACTACCCGG CGGCCAGGGA GTTCCACGAG CGGGCGAGAC GGCTCGCCGT CGAGCAGTCG GACACGTTCG GGGAGCAGTT CGCCGAGATC GGGCTCGGGC TGGGGGCGCG CAGGGACGGA GATCTCGACA CCGCCGAGGC GCACCTGCGC AGCGTGCTCG ACCTGCACCG CCGGATGAGT CACGAGCCCT GCGTTCCCGC GCTGATCCTG GCCGAGCTCG GATTCATCGC CGAGCACCGG GGCGACGCGC GCGCCGCCCT CGACCTGCAG CTGGACGGCC TCGCCACCGC CCGGACCACC GGCGATCCCC GAGCGGTCGC GCTGGCCCTG GAGGGCCTGG CCGGGGCGCA GACGCTGGCC GGTCACCCCG ATCACGCCGC CCGGCTGCTG GGGGCCGCCG CGGCGGCCCG GCAGTCGGTG TGGATGCCGC TGCCGGCCGG TGAAAGGTTC GACGTCGATC GCATCACCGC CAAGGCCGGG GAGGCCCTCG GTGACGCGGG TTTCGACGCC GAGTTCGAGC TTGGCGGCGC GCTGCGGCCC GACGAATACC TGGCTCACCC GTCCCTGGCC GGGCACACGC GACGGACACC GGTCAGGTCC GCGACGCCCT GA
|
Protein sequence | MRFGVLGPLE VWTADGRVVR VPELKVRALL ADLLVHRGRP VSADRLIDDL WGTALPNNPL GTLQNKIWQL RRVLEDAEPG GRDLVMSRPP GYQLLVEPDA VDEGRFHELA TRARASGDSR VRAALLADAL AVWRGPAFAD FADEGFTRTA TARLEEQRLT ALEEQAEARL KLGEHALLAD ELGDLVALHP LRERLRAAHV RALYLAGRQS DALNSYGDLR ERLAESLGLA PGPELAALHQ AILVQDPALT AVPSPATTVA RPLTNVPSAL TDLIGRAEAV GELRSLLKAG RLVTLTGAGG VGKTRLALAI AEQVGQSFPG GVRLVEFAAL APSSRSPAHP RGRRETAPAT EVHDVVGEVL GVRDVMTSAP EPLSPTERIV HALGDQPTLL VFDNCEHVIE PVAELAERLL RAAPRLRILA TSQEPLGITG EHLQAVRPLR LPAPATDLGP AAARRFSAVE LFVARSSAAA PGFVLDETNV EAVVSICRRL DGIPLALEMA ATRVRALGVH EVAARLDDRF HLLAAGARGA PARQRTLRAV IDWSWGLLGE QERAVLRRLA VHPGGCTLAA AEEVCAGDDV DRTEVLDLLA RLVDCSLVVM SAGADGPRYR LLESVTAYCV ERLREAGELE EFRLRHRDYY TDLAERAEPR LRGHDQRLWL RRLDAETANL RTALEGAARL GDADRALRLA NALTWYWYLR GRIGEAERFL ATALSAGDTA PAATVARATA WLGGLRLLLG GSADPAAEYR AALRAAERID DPGGRARMEW FLGSHTYGIG DLSTSEDLTG RALATFRSLG DRWGMAAALN NRTFHAKLRG DFQALRRDGE RSLELFRDLG DQWGQLQTVT PLATLAEIAG DYGQAGRLYR DGLRMADDLG LWPEVSFTLS GLGRMALLSK DYPAAREFHE RARRLAVEQS DTFGEQFAEI GLGLGARRDG DLDTAEAHLR SVLDLHRRMS HEPCVPALIL AELGFIAEHR GDARAALDLQ LDGLATARTT GDPRAVALAL EGLAGAQTLA GHPDHAARLL GAAAAARQSV WMPLPAGERF DVDRITAKAG EALGDAGFDA EFELGGALRP DEYLAHPSLA GHTRRTPVRS ATP
|
| |