Gene Sros_5773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5773 
Symbol 
ID8669067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6319099 
End bp6320193 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content71% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003341262 
Protein GI271967066 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.230494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.48372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCGA CCTCAAGTAG CGAGGACCTG AAGGGGGATA CGGCCCGGCG CAAGCCGGGC 
CGTTCCGGCA GCCGGAGCCC GCTGATCCGC TTCCTGGCCC GCAGGGTGCT CACGGCGCTG
CTGCTGGCCG TGGGCATCAC CCTGGTCACC TTCGTCCTCA CCAACCTGGT CCCCGGCGAC
CCCGTCTCGG CCAACCTCGG CCAGCGGGCC CTCGGCGACC CGGCGATCGT CGCGCAGTGG
CGGGCCGAGC ACGGCCTGGA CAAGCCGCTC CCCCAGCAGT ACCTGATGCA CCTTCAGGGA
GTGGTCCAGG GCGACCTCGG GACGAGCCAG CAGAGCCACC GCCCGGTCAT GGACGACCTG
GCCGAGTCCG TGCCCGCCAC GCTCGAACTG GCCGGCGCCG CGATCCTGAT CTCCCTCGTG
GCGGGGGTGG CGTTCGGCGT GGTCGCGGCG CTCCGCCGGG ACCGGCTCTC CGACCACCTG
CTCCGGGTCC TCAGCCTGGT CGGCATCTCC GTGCCGACGT TCTGGCTGGC GCTGATGGCG
TTCTACGTCT TCTTCTACCG GTTGCAGGTC ACCCCGGGCA GCGGCCGCAT CGACCCGACC
ATGAGCCCGC CCCCGCAGGT CACCGGGCTG TACACGATCG ACTCCGCCCT GGCGGGACAG
TGGGACGTGT TCGCCTCCGC GGTCGGCCAC CTCATCACCC CCGCGCTGGT GCTGGCCCTC
TACACGATCG GCCTGCTCAC CCGGTTCACC CGGTCGGCGG TGCTGGAGGT GCTGGGCCAG
GACTACGTGC GCGCCGCACG GGCCAAGGGC CTGCCCGGCC GGGTGATCCT GTTCCGCTAC
GTGCTCCGCT CGGCACTGGT GCCGATCATC ACGGTCGCGG GCCTGGCCTT CGGCAGCCTG
CTGTCCGGCA CCGTGCTCGT CGAGGCGATC TTCGCCTGGC CGGGCGTGGG ACAGTACGCC
TACAAGAGCG CGACCACCCT CGACCTGCCC GCCGTGATGG GCGTCGGCCT GGTGGTGGGC
GGGGTCTACC TCGTCATCAA CCTGATCGTC GACGTGCTGT ACGGCGTCAT CGACCCCAGA
GTGAGACTCC AGTGA
 
Protein sequence
MSPTSSSEDL KGDTARRKPG RSGSRSPLIR FLARRVLTAL LLAVGITLVT FVLTNLVPGD 
PVSANLGQRA LGDPAIVAQW RAEHGLDKPL PQQYLMHLQG VVQGDLGTSQ QSHRPVMDDL
AESVPATLEL AGAAILISLV AGVAFGVVAA LRRDRLSDHL LRVLSLVGIS VPTFWLALMA
FYVFFYRLQV TPGSGRIDPT MSPPPQVTGL YTIDSALAGQ WDVFASAVGH LITPALVLAL
YTIGLLTRFT RSAVLEVLGQ DYVRAARAKG LPGRVILFRY VLRSALVPII TVAGLAFGSL
LSGTVLVEAI FAWPGVGQYA YKSATTLDLP AVMGVGLVVG GVYLVINLIV DVLYGVIDPR
VRLQ