Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5773 |
Symbol | |
ID | 8669067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 6319099 |
End bp | 6320193 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003341262 |
Protein GI | 271967066 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.230494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.48372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCCGA CCTCAAGTAG CGAGGACCTG AAGGGGGATA CGGCCCGGCG CAAGCCGGGC CGTTCCGGCA GCCGGAGCCC GCTGATCCGC TTCCTGGCCC GCAGGGTGCT CACGGCGCTG CTGCTGGCCG TGGGCATCAC CCTGGTCACC TTCGTCCTCA CCAACCTGGT CCCCGGCGAC CCCGTCTCGG CCAACCTCGG CCAGCGGGCC CTCGGCGACC CGGCGATCGT CGCGCAGTGG CGGGCCGAGC ACGGCCTGGA CAAGCCGCTC CCCCAGCAGT ACCTGATGCA CCTTCAGGGA GTGGTCCAGG GCGACCTCGG GACGAGCCAG CAGAGCCACC GCCCGGTCAT GGACGACCTG GCCGAGTCCG TGCCCGCCAC GCTCGAACTG GCCGGCGCCG CGATCCTGAT CTCCCTCGTG GCGGGGGTGG CGTTCGGCGT GGTCGCGGCG CTCCGCCGGG ACCGGCTCTC CGACCACCTG CTCCGGGTCC TCAGCCTGGT CGGCATCTCC GTGCCGACGT TCTGGCTGGC GCTGATGGCG TTCTACGTCT TCTTCTACCG GTTGCAGGTC ACCCCGGGCA GCGGCCGCAT CGACCCGACC ATGAGCCCGC CCCCGCAGGT CACCGGGCTG TACACGATCG ACTCCGCCCT GGCGGGACAG TGGGACGTGT TCGCCTCCGC GGTCGGCCAC CTCATCACCC CCGCGCTGGT GCTGGCCCTC TACACGATCG GCCTGCTCAC CCGGTTCACC CGGTCGGCGG TGCTGGAGGT GCTGGGCCAG GACTACGTGC GCGCCGCACG GGCCAAGGGC CTGCCCGGCC GGGTGATCCT GTTCCGCTAC GTGCTCCGCT CGGCACTGGT GCCGATCATC ACGGTCGCGG GCCTGGCCTT CGGCAGCCTG CTGTCCGGCA CCGTGCTCGT CGAGGCGATC TTCGCCTGGC CGGGCGTGGG ACAGTACGCC TACAAGAGCG CGACCACCCT CGACCTGCCC GCCGTGATGG GCGTCGGCCT GGTGGTGGGC GGGGTCTACC TCGTCATCAA CCTGATCGTC GACGTGCTGT ACGGCGTCAT CGACCCCAGA GTGAGACTCC AGTGA
|
Protein sequence | MSPTSSSEDL KGDTARRKPG RSGSRSPLIR FLARRVLTAL LLAVGITLVT FVLTNLVPGD PVSANLGQRA LGDPAIVAQW RAEHGLDKPL PQQYLMHLQG VVQGDLGTSQ QSHRPVMDDL AESVPATLEL AGAAILISLV AGVAFGVVAA LRRDRLSDHL LRVLSLVGIS VPTFWLALMA FYVFFYRLQV TPGSGRIDPT MSPPPQVTGL YTIDSALAGQ WDVFASAVGH LITPALVLAL YTIGLLTRFT RSAVLEVLGQ DYVRAARAKG LPGRVILFRY VLRSALVPII TVAGLAFGSL LSGTVLVEAI FAWPGVGQYA YKSATTLDLP AVMGVGLVVG GVYLVINLIV DVLYGVIDPR VRLQ
|
| |