Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5760 |
Symbol | |
ID | 8669054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 6306444 |
End bp | 6307073 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_003341251 |
Protein GI | 271967055 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.238463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.204819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCAGAGG TCAATGGTCT CAGCCGGAGA TCCGCGCAGA CCAGGCGCCG CATCGCCGAG GCCGCGCACG GACTGTTCGC CACCCGCGGC TACACCGGGA CGACCTTCCA GGAAGTCGCC GACGCCGCCG GAGTGTCGGC TCCGACCGTC TACTTCCACT ACGGGAGCAA GAGCCAGCTC CTCAAGCACG TCGTCGACGT CGCATCGGTG GGCGACGACG AGCCCGTCCC GCTTCTCGAC CGGCCCTGGT TCACGGCGCT GAGGACGGCG CGGGACCCGG CGGTGGTCAT CCGGCGGTGG GTCCACGAGT CCGGCGTCAT CCTCGACCGG GTCGCCCCGA TCCTCTCGGT GGTGCGCGAC GCGGCGGCCG GCGATCCCGA CATGGCCGCC CAGTGGGCGC GGAACAACGA GCAACGGCGC ACCGCACATG GCACGTTCGT CACCATCCTC GCCGGCCTGC GCGCCCTGAA GCCGGGCCTG ACCCGGCGCC GGGCCGCCGA CGTCACCGTC GCGCTGCTGT CACCGGATCT CTTCCTGGTG CTGACCCGTG AATGCGCGTG GAGCACGGCC CGCTGGGAGA CGTGGGCTGT CGATCATCTC GCCCACGGCC TGCTTCCGGA CCCCCCGTGA
|
Protein sequence | MSEVNGLSRR SAQTRRRIAE AAHGLFATRG YTGTTFQEVA DAAGVSAPTV YFHYGSKSQL LKHVVDVASV GDDEPVPLLD RPWFTALRTA RDPAVVIRRW VHESGVILDR VAPILSVVRD AAAGDPDMAA QWARNNEQRR TAHGTFVTIL AGLRALKPGL TRRRAADVTV ALLSPDLFLV LTRECAWSTA RWETWAVDHL AHGLLPDPP
|
| |