Gene Sros_5748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5748 
Symbol 
ID8669042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6293937 
End bp6295124 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content74% 
IMG OID 
Productacyl-CoA transferase/carnitine dehydratase 
Protein accessionYP_003341239 
Protein GI271967043 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0681269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.471663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGGCC CTCTCGCCGG GATCCGGGTC GCCGACTTCT CCCGGGTGCT GGCCGGGCCG 
TACGCCACCA TGATCCTCGC CGAGCTCGGC GCGGACGTGG TCAAGGTGGA GCATCCGGAG
CACGGCGACG ACACCCGGGC CTGGGGCCCG CCGTACGCGG GCGGCGAGGC CGCCTACTAC
CTCGCCGTCA ACCGCGGCAA GCGGAGCGTC GCGCTCGACG TGAAGCATCC CTCCGGCCGC
GAGATCGCCC AGCGGCTGTG CGCGGACGCG GACGTGGTCA TCGAGAACTT CCGCCCCGGG
GTCGCCGAGC GCCTGGGCGT CGGGCACGAG TCGGTACGGC AGGCCAACCC GGGCGTCGTG
TACTGCTCGA TCATCGGGTT CCCGGGCGGC GACCGGCCGG GTTTCGACGC GACGATCCAG
GCCGAGAGCG GCTACATGCA CATCACCGGC GAGACCCCGA GCAAGGTCGG CGTCGCGATC
ACCGATGTGC TCGCCGGGCT CAACGCGGCC GTCGCGATCC TGGGCGCGCT GCACCGGCGG
GCGACCCGGG GGCAGGGCGA GCGGGTCGAG GTGTCGCTCA TAGGCTCGGC GCTGTCCGGG
CTGGTCAACG TGGCGCAGAG CGCGCTGGTC TCGGGCGAGG AGGCGCTCGC CTACGGCAAC
GCGCACCCGA CGGTGGTGCC CTACCAGACG TTCGAGGCGG CCGACGGCCG GTTCGTGGTC
GCCGTGGGCA ACGACCGGCT GTTCCGCGCC CTGTGCGCGG CGATCGGGCG GGAGGACCTG
GGCACCGACG CCCGCTTCCG CACCAACGCC GGGCGCGTGC GCGAGCGCGA CGCGCTGATC
GCCGAACTCG CCGCCGTCTT CCCGACCCGT CCGGTGGACG AGTGGATCGC GCTGCTCGGC
ACCGCCGGAG TCCCCGCCGG CAAGATCCGG GGCGTCCTGG ACGCGATCCG GACGGCCGAC
GGCGCGACCC TCCAGGTCCG GCATCCGACC GCGGGCCCGC TGGAGCTCGT CCGCACCGGA
TTCACCCTGG AGAGCGTCCC CGCCGACCGC GACATCGTTG CCCCGCCGCT GCTCGGCCAG
CACACCCACG AGCTGCTGGC CGAGCTCGGC GTCACCGACG ACCGCATCGC CCTCCTGCAG
CGGGAGGGTG TCATCCATCA AGCCGTTCAC CAAGCGAGGC CCCATTGA
 
Protein sequence
MTGPLAGIRV ADFSRVLAGP YATMILAELG ADVVKVEHPE HGDDTRAWGP PYAGGEAAYY 
LAVNRGKRSV ALDVKHPSGR EIAQRLCADA DVVIENFRPG VAERLGVGHE SVRQANPGVV
YCSIIGFPGG DRPGFDATIQ AESGYMHITG ETPSKVGVAI TDVLAGLNAA VAILGALHRR
ATRGQGERVE VSLIGSALSG LVNVAQSALV SGEEALAYGN AHPTVVPYQT FEAADGRFVV
AVGNDRLFRA LCAAIGREDL GTDARFRTNA GRVRERDALI AELAAVFPTR PVDEWIALLG
TAGVPAGKIR GVLDAIRTAD GATLQVRHPT AGPLELVRTG FTLESVPADR DIVAPPLLGQ
HTHELLAELG VTDDRIALLQ REGVIHQAVH QARPH