Gene Sros_5741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5741 
Symbol 
ID8669035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6284717 
End bp6285877 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content72% 
IMG OID 
Productmandelate racemase/muconate lactonizing protein 
Protein accessionYP_003341232 
Protein GI271967036 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.190223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCC GAGATGTCCG GGCACGCCTC ATCGAGCTGC CCTACCCGCG CCCGTTCGTC 
CCGTCGTGGG CTCCCGAGGG CGCCCACCGG AGCATGTCCG CCGTGATTGT CGAGGTCGAG
ACCGACGAGG GCGTGATCGG CGTCGCGGGC GGCGACATGG GGCACGACAC CGGGCCGCTG
CTGCTGGAGA CCATCAGGGG ATGGATCCGG CCCCGGCTGG TCGGGATGGA CCTGTTCGCC
ACCGGACACA TCGCCAACCA CCTGCGCTAC GTGGCCGAGT ACGTCTTCCC GCGCCCGTGG
GTGGTGGGCG TGGCCGTCTG GGACGCGGTG GGCAAGGCCT GCGGCCGCCC GCTGTACAAG
CTCTGGGGCG GGCACGCCGG CAAGGTCCGC GCCTACGCCA GCTTCGGCGA GGTCCGCGCT
CCCGAGCAGC GGGCCGAGGA CGCGCTGCGC GTGGTGTCGG AGGGCTTCGC CGGGGTGAAG
CTGCGCGTCC ACGCCGACAC GATCGCCGAG GACGTCGCCC AGGTCGCGGC GGTCCGCGAG
GCCGTCGGCC CGGAGGTCGC CATCATGGTG GACGCCAACC AGGCGGCGGC GCGCTGGCGC
TACCGGCCCG ACGGCAGCCG CATGCTGTGG GACTTCGACA GGGCGCTGAC CACCGCGCGG
GAGCTGGCCG ACCTGGGCGT CGCCTGGCTG GAGGAGCCGC TCCCCCGCCA CGACTACCGC
GCGCTGCGCG AGCTCACCGC GGCCTCGCCG ATCCCCATCG CCGGAGGCGA GCACAACCGG
GGCATCGGCC AGCTCGTCCG GATGCTGGAG GACGACTGCT TCACCATCTA CCAGCCGGAC
GCCAACGAGA GCGAGGACAT CGCCGCCCTG CGCGACTTCG GCGCGATGGC CGCCGCCAGG
CACCGCCGGG TCATCCCGCA CGCCTGGGCC ACCGGGCTCG GCGTGGCGGG CAACCTGCAG
CTGTGCGCCG CGCTGCCCAA CTGCGACTGG CTGGAATACC CCTACGATCC TCCAGTGATC
ATTCCGGAGG TTTTCCACGT CATGCTCACC GAGCCGCTCC TGCCCGATTC CACCGGGCTG
GTAGCCGTTC CGGAGCTCCC CGGTCTGGGT GTAGAGCTGG ACCACGCGGC GATCGAGCCG
CTGACCGTCC AACGGGTCTG A
 
Protein sequence
MRIRDVRARL IELPYPRPFV PSWAPEGAHR SMSAVIVEVE TDEGVIGVAG GDMGHDTGPL 
LLETIRGWIR PRLVGMDLFA TGHIANHLRY VAEYVFPRPW VVGVAVWDAV GKACGRPLYK
LWGGHAGKVR AYASFGEVRA PEQRAEDALR VVSEGFAGVK LRVHADTIAE DVAQVAAVRE
AVGPEVAIMV DANQAAARWR YRPDGSRMLW DFDRALTTAR ELADLGVAWL EEPLPRHDYR
ALRELTAASP IPIAGGEHNR GIGQLVRMLE DDCFTIYQPD ANESEDIAAL RDFGAMAAAR
HRRVIPHAWA TGLGVAGNLQ LCAALPNCDW LEYPYDPPVI IPEVFHVMLT EPLLPDSTGL
VAVPELPGLG VELDHAAIEP LTVQRV