Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5738 |
Symbol | |
ID | 8669032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 6281546 |
End bp | 6282904 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | ABC-type sugar transport system periplasmic component-like protein |
Protein accession | YP_003341229 |
Protein GI | 271967033 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.599702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0824986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGTT CCCTCCGGCT GGCCGCGGCA GCCACCGCGC TCGGCCTGAC GATCACAGCT TGCGGCTCGA CGGCACCCGA GGTCTCCGCC GACGGCGGCG GACTCGGCAC GGCGGAGAAC CCCGTGTCGA TCAGGGTCAT CGCCAACGAC GCCTTCGCCA AGCAGTGGCA GGACCAGCTG GTCCCCGAGT TCAACAAGAA GTACCCGAAC ATCAAGGTCT CGGTGGACGG CGTGCCGTAC AACGACCAGC TTCCCAAGAC CATGCTGGAG CTGACCGGGC CCACCGCGAC GTACGACGTG GTGCTCGGCG ACGACCCGTG GGTCCCGCAG CTCGCCAAGA CCGGCGGCCT GATGGACCTC AAGGCCGACG TGACCAAGTG GACCGACCCG GGCTACGACT GGGCCGACTT CAACCCCTCC CCGCTCGCCG CGGGCCAGTG GGACGGCAAG CAGTACGCCG TCCCGGTCCG CTCCAACCTG CTGCTGATGC TCTACAACAA GACGCTGTAC AAGAAGGCCG GGGTCCAGGA ACCCACCACG GAGACGACGT GGGAGCAGTA CTTCAAGGAC GCCGAGAAGC TGGTCCAGGA CACCGACGGC GACGGGAAGA CCGACGCCTG GGCGATCGGC ACCTACTTCA CCAAGGACCC GCTCACCCCG ACGATCTGGC AGACCGTCCT GAACTCCAAC GGCGTGGCGC TGCTGGATGA CAACCTCAAG GTCGCCTTCG ACAACGAGAC CGGCGTGAAG GCCCTTCAGA CCCACGTCGA CCTGCTGAAG TACGCCCCGC CGGGAGCGAG CACCTACCAG TTCAACGAGC CGCTCGAGGC CTTCCGCCAG GGCAGGACCG CCACCATGTT CATGTGGGGC AGCGTCTACA AGGGCTCGGC GGTGGACAAG GCGTCCACCA CGCTGACGCC CGAGGAGGTC GGCGTCACCA CCCTTCCGGC GGGTTCGGCC GGTCCGGGTG CGCACCGCGG TGTCTGGTCG GCGGGCATCG CCAAGAAGTC CCAGCACCCG GCCGCCGCGT GGACGTGGCT GCAGTGGGTC ACCTCCAAGG AGGGCGAGAA GTTCACCGGG AGCGCGTTCG GGACGTTCCC GGCGCGTAAC TCCTCGCTGG ACGGCACCCC GCCGGCCGAG TGGGCCGCCC CCGTCTACAA GGCGCTCAAG GACGGCTACA CCGTGGTGGA CAAGAACAAG ATGTGGCGCC CGCGGCTCCC CGAGTCCGAC GCGGTCCAGC AGATCCTCGC TCTGCAGACG AGCCGGGCGA TGTCCGGCCA GGCGACCTCG GAGCAGGCGA TCGACCAGGC GGCGAAGGAC GTCACCGAGC TGCTGAAGTC CAAGGGCTAC CAGCAGTGA
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Protein sequence | MRRSLRLAAA ATALGLTITA CGSTAPEVSA DGGGLGTAEN PVSIRVIAND AFAKQWQDQL VPEFNKKYPN IKVSVDGVPY NDQLPKTMLE LTGPTATYDV VLGDDPWVPQ LAKTGGLMDL KADVTKWTDP GYDWADFNPS PLAAGQWDGK QYAVPVRSNL LLMLYNKTLY KKAGVQEPTT ETTWEQYFKD AEKLVQDTDG DGKTDAWAIG TYFTKDPLTP TIWQTVLNSN GVALLDDNLK VAFDNETGVK ALQTHVDLLK YAPPGASTYQ FNEPLEAFRQ GRTATMFMWG SVYKGSAVDK ASTTLTPEEV GVTTLPAGSA GPGAHRGVWS AGIAKKSQHP AAAWTWLQWV TSKEGEKFTG SAFGTFPARN SSLDGTPPAE WAAPVYKALK DGYTVVDKNK MWRPRLPESD AVQQILALQT SRAMSGQATS EQAIDQAAKD VTELLKSKGY QQ
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