Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5735 |
Symbol | |
ID | 8669029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 6278355 |
End bp | 6279494 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | membrane protein-like protein |
Protein accession | YP_003341226 |
Protein GI | 271967030 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.423891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.171619 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAACCG CGACGAAAGT GCCGCAGACA CGGAGCATGA GCGGCGAGGA GCTCTCGGCC GACCACGCGT GGACGACCCT GCGCAGGTAC GGCCGCTGGC ACCTCATCCG TGACTCCTTC GCCAGATTCA GATACGGCGA CGGAATGACC AACTCACGGG CACTGGCCTT CCAGATCTGC CTGTCCATCA TCCCCGGCGC CATCGCGCTG GTCGGGCTGA GCTCGGTGCT CAACCAGGAG CAGCTCGGCC AGGTGCTGGA GCTGACCCTG AGCAGGATCG CTCCCGGGGC CGGGGTCGAG GCGGTCAAGG ACGTGCTCGC CGACAGCCAC CGGCAGGCGG GCCACACCGG AGGGACCCTC GCCCTGTGGC TCGGCCTGGC CACCGCGCTG TTCTCGCTGA CCAGCGCCAT GGCCCAGGTG GAGCGCGGGG CCAACCGCAT ATACGGCGTG GAACGCGACC GGCCGTTCCA TCGCAAGTAC GGCAAGGCCC TGCTGATGGC CGTCACCGCC GGCGCCTTCA TGACCGTGGG CTTCGTGGTG ATGGTCGGCG GCGGGGCGAT CGGGCGGGCA CTCGCCAAGG TCTACGGCTG GAACGACGGC ATGATGGACG CGTTCACGCT GGTCCGCTGG CCGGTCGGAT TCCTGCTGGC CCTGCTGTCG GCCTCGGTGC TGTTCCGCGC CGCCCCCCGG CGCAGGCAGC CGGGTCACAC CTGGCTGGCG TTCGGCGCCC TGGTCTCACT CGTCCTGTGG ACGGTCTTCA CCCTGCTGCT GGCCCTGTAC ACCGAGCGCA GCGGCACCTT CGGCGCCACC TACGGCCCGC TCACCGCCGT CATGGCACTG CTGCTGTGGT CCTTCCTCAG CTCGATGGCA CTCTTCCTCG GGCTGGCCTT CGCCGCGCAG CTGGAGGCGT GCCGCGGCGG GAGCGCGGGG CCGGTCGAAC CGGATCCCGG GCCCACCGCC GAGGAGGAGC GGGAGCCCCT GGTGGGCGCC GTCGGCGCGG CGGTCGGCGC GGCCGTGCGG GAACTGGCGC GGCTCTGGCG CAGGCGCCGG GAGGGCCGGG ACCGGGCATC GGAGGCGGGG AGCCGGCGGG GCGGCGCCGC GGCGGCGGCC CGCGGCCACG CCGGTGAGCG CGCCGGCTGA
|
Protein sequence | MGTATKVPQT RSMSGEELSA DHAWTTLRRY GRWHLIRDSF ARFRYGDGMT NSRALAFQIC LSIIPGAIAL VGLSSVLNQE QLGQVLELTL SRIAPGAGVE AVKDVLADSH RQAGHTGGTL ALWLGLATAL FSLTSAMAQV ERGANRIYGV ERDRPFHRKY GKALLMAVTA GAFMTVGFVV MVGGGAIGRA LAKVYGWNDG MMDAFTLVRW PVGFLLALLS ASVLFRAAPR RRQPGHTWLA FGALVSLVLW TVFTLLLALY TERSGTFGAT YGPLTAVMAL LLWSFLSSMA LFLGLAFAAQ LEACRGGSAG PVEPDPGPTA EEEREPLVGA VGAAVGAAVR ELARLWRRRR EGRDRASEAG SRRGGAAAAA RGHAGERAG
|
| |