Gene Sros_5730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5730 
Symbol 
ID8669024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6273076 
End bp6274380 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content69% 
IMG OID 
ProductArginine deiminase 
Protein accessionYP_003341221 
Protein GI271967025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.988555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCCTC GACAACGTTC GGGGGACGTT GTGAGCACGA AATACGGAGT CCACTCCGAG 
GTGGGCACGC TGCGGCAGGT GATCGTGCAC AGGCCCGATC TCAGCCTGAA GCGGCTCACA
CCGAGCAACA AGGACGAGCT GCTCTACGAC GACGTGCTCT GGGTCAGCCG CGCCCAGAGC
GAGCACGACG CGTTCGTGGC CATGATGCGC GGCCGCGGCA TCGAGGTCTT CCACCACCAG
CAACTGCTCG CCGAGGCGCT GGAGGCCGCG CCCGAGGCCA AGCGGCACGC CGTGGAACGC
ATGGTCAGCC ACCTGACGGT GGGACCCGTC CTCGTCGACG AGGTCCGTGC CGAGCTCGCC
TCCTGGAGCG GGGAGAAGCT GGCCGAACAC CTGATCGGCG GGCTGACCAA GGAGGAGTTC
GTCACCGCCA CCCAAGCCGG CCGCGAAGGC TTCGACGCGC GCTCCCTGGT CACCGCGATG
GCCAAGACGG GATCGTTCAT CCTGCCGCCG CTGCCGAACT CGCTCTACCA GCGCGACCCC
TCGGCCTGGC TGTACGGCGG GGTCTCGCTG AACCCGCTCT ACTATCACGC CCGCCGTCTG
GAGACGATCA ACCAGAGCAT CGTCTACCAC TTCCACCCGA TGTTCGCCGG CGACGGCTTC
GCCTACTGGT ACCCGCCGAT GGGCGACGAC GGCAGCTTCG ACGAGGAGGA CTTCGGCCGC
GCCTCGCTGG AGGGCGGCGA CATGATGCCC ATCGGCAACG GCGTCGTGGC CATCGGCGTC
AGCGAGCGCA CCAGCCCGAT CATGATCGAG CACCTCGCCA GGGAGCTGTT CGCCGCCGGG
GCCGCCACCA GGGTGCTCGC GGTCAACATC CCGCCGCACC GCTCCTACAT GCACCTCGAC
ACCGTGTTCA CGCTGCTGGA CGTCGACAAG GCCACCGGCT ACCCGCCGGT CGTGGAGAAC
GCGGCGGTCT ACTCGCTGCG GCCGGGCGAC AAGGAGGGCG TCGTCGAGGT GCACCGGGAG
CCGAACCTGG CCGCCGCGTT CGAGGACGCG CTCGGCATCG GCAAGCTCGA CATCGTCCCC
ACCGGGGGAG ACGACTACCA GCGGGCCAGG GAGCAGTGGG ACAGCGGCAG CAACTTCGTC
GCCCTGGAGC CGGGCGTCGT GGTGGGGTAC CACAAGAACG AGTTCACCAA CAGGAAGCTG
CGCGAGCACG GCGTGGACGT GGTCGAGATC GAGGGCTTCG AGCTGGGCAA GGGCCGGGGC
GGCGGGCACT GCATGACCTG CCCCATCCTG CGCGACCCGG TCTAG
 
Protein sequence
MLPRQRSGDV VSTKYGVHSE VGTLRQVIVH RPDLSLKRLT PSNKDELLYD DVLWVSRAQS 
EHDAFVAMMR GRGIEVFHHQ QLLAEALEAA PEAKRHAVER MVSHLTVGPV LVDEVRAELA
SWSGEKLAEH LIGGLTKEEF VTATQAGREG FDARSLVTAM AKTGSFILPP LPNSLYQRDP
SAWLYGGVSL NPLYYHARRL ETINQSIVYH FHPMFAGDGF AYWYPPMGDD GSFDEEDFGR
ASLEGGDMMP IGNGVVAIGV SERTSPIMIE HLARELFAAG AATRVLAVNI PPHRSYMHLD
TVFTLLDVDK ATGYPPVVEN AAVYSLRPGD KEGVVEVHRE PNLAAAFEDA LGIGKLDIVP
TGGDDYQRAR EQWDSGSNFV ALEPGVVVGY HKNEFTNRKL REHGVDVVEI EGFELGKGRG
GGHCMTCPIL RDPV