Gene Sros_5645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5645 
Symbol 
ID8668939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6180823 
End bp6182037 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content72% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_003341139 
Protein GI271966943 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCAG GATTGACCGG GAGGCAGCGG GCCTTGCTCG CGCTGGTGTG CGCGGTGGCG 
GTGTCGGCCA TCTACGGCAT CCAGCCGGTC CTCGAGGCCG CGGGCGAGGA CCTCGGGCTG
AGCAAAGGAA CACTGGGGTG GCTGGTCGCC GCCGGCCAGA TCGGCTATCT CGCGGGGCTG
GTGCTGCTGG TCCCGCTCGG TGACCTGTTC GACCGCCGCG GACTCATCAC GGTGCACCTG
CTGCTCACAG CGGTGGGTGC GGGGGTGGCC GCCGTCGCAC CCGGTGGTGG CATCGCGATC
GCGGGCCTGG CCCTGGCCGG ACTGTTCGCC GTGGTCGTCC AGACCACGGT GGCCTACGTC
GCCGCCGTCT CACCGGCCGG CGAGCGCGGC CGCAACATCG GAGCGGTCAC CTCGGGCGTG
GTCATCGGGA TCCTCGGAGT GCGGGTGGTC GCGGGCACAC TGGGCGAGCT GGCCGACTGG
CGCATGGTCT ACCTCGTAAT CGCCGGGCTC TGCGCGATGC TCGCGCTCGC CGCCCGGTTC
ACCCTCGATG CCGACATCCG CCGCCCCCGA GCCCGGTACG GGCAGTTGCT GTCATCGCTG
GGGCGGCTGG TCGCCGGTGA CCGGCTCTTC CTCGGTCGCG GACTGGTCGC GTTCTTCCTG
TTCGCCTCCT TCGGCACGCT GTGGAGCGGA CTGGCGCTCC CGCTCGGCGA CGCGCCGTGG
CACTTCGGCA CTACCGAGAT CGGACTGTTC GGACTCGCCG GTCTCATCGG TGCGCTGGGC
GCGGCCCGGG CCGGCCGATG GGCCGACCGG GGCCTGGCGC CCTCGGTCAC CGGCTGGTCG
CTGGCCCTGC TCACAGCTTC GTGGCTGCTG ATCGCTCAGG CGGGGTCATC GCTGTGGCTG
TTGATCGTCG GCGTCATCGT CCTGGACTTC GCCGTGCAAG CCGTTCACGT CAGCAGCCAG
CACCTGCTCA CCACCGCCCG CCCCGACCGG AGCAGCAGCG TCATCGGCGC CTACATGGCC
TTCTACTCCC TCGGCTCCGC GCTCGGCGCG ATCACCACCA CCTGGGCCTA CAGCGCCGCG
GGATGGTCGG CCGCCAGCCT GCTCGGCGCG GCCTACGCCG CACTCGCACT CCTCGTCGCC
GTCTCGACCC GACGTCTCAC CGTCCTGCCG CGGGCGCAGC AACCAGGTGC GTCCGTGTCG
GCTGCGTCCC GCTGA
 
Protein sequence
MSSGLTGRQR ALLALVCAVA VSAIYGIQPV LEAAGEDLGL SKGTLGWLVA AGQIGYLAGL 
VLLVPLGDLF DRRGLITVHL LLTAVGAGVA AVAPGGGIAI AGLALAGLFA VVVQTTVAYV
AAVSPAGERG RNIGAVTSGV VIGILGVRVV AGTLGELADW RMVYLVIAGL CAMLALAARF
TLDADIRRPR ARYGQLLSSL GRLVAGDRLF LGRGLVAFFL FASFGTLWSG LALPLGDAPW
HFGTTEIGLF GLAGLIGALG AARAGRWADR GLAPSVTGWS LALLTASWLL IAQAGSSLWL
LIVGVIVLDF AVQAVHVSSQ HLLTTARPDR SSSVIGAYMA FYSLGSALGA ITTTWAYSAA
GWSAASLLGA AYAALALLVA VSTRRLTVLP RAQQPGASVS AASR