Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5633 |
Symbol | |
ID | 8668927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 6169616 |
End bp | 6170284 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_003341128 |
Protein GI | 271966932 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.219719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.134039 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGAAGA CCTCTCTTCT CGCCTCGGCT CTGACCGTGC TGGCCCTGGC CGCCGCCCCG GCCGCCGCCC AGTCGGTCAC CACGGGTTCC GTCCTCCGGG TCTCTCCCAC GCCCATGCCC ACGGACATGA CCTCCGAGTC GCCCACGGAC ATGACCTCCG AGTCGCCCGG CGCCATGACC AAACCGTTCG GCCCGGGCTG CTCCTCCCTG CCCACCACCG GTGAGGGCAG CCCGGAGAAC ATGGCCAAGG AGCCGGTCGC CACCGCGGCG TCCTACAACA CGCAGCTGTC CACCCTGACC GAGGCCATCA AGAAGGCCGG GCTGGTCGAC ACCCTGAACT CCGCCAAGGA GATCACGGTG TTCGCCCCCA CCAACGAGGC GTTCAGCAAG ATCCCGAAGG AGATGCTCGA CAAGGTCCTG GCTGACAAGG CGCAGCTCAC CAAGATCCTG ACCTACCACG TCGTCGAGGG GAGGAAGGCC CCCGCAGAGC TCACCGACGC GACGCTCAGC ACGCTCGCGG GCGGCACGCT GACCGTCAAG GGCTCCGGTG AGGACTACAC CGTCAACGAC GAGGCCAAGG TCCTGTGCGG CAACATCCAG ACCGCCAACG CCACCGTCTA CCTGATCGAC GCGGTCCTGC TGCCCACCGC CGGAGCGACA CCGAGCTGA
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Protein sequence | MKKTSLLASA LTVLALAAAP AAAQSVTTGS VLRVSPTPMP TDMTSESPTD MTSESPGAMT KPFGPGCSSL PTTGEGSPEN MAKEPVATAA SYNTQLSTLT EAIKKAGLVD TLNSAKEITV FAPTNEAFSK IPKEMLDKVL ADKAQLTKIL TYHVVEGRKA PAELTDATLS TLAGGTLTVK GSGEDYTVND EAKVLCGNIQ TANATVYLID AVLLPTAGAT PS
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