Gene Sros_5633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5633 
Symbol 
ID8668927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6169616 
End bp6170284 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_003341128 
Protein GI271966932 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.219719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.134039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAAGA CCTCTCTTCT CGCCTCGGCT CTGACCGTGC TGGCCCTGGC CGCCGCCCCG 
GCCGCCGCCC AGTCGGTCAC CACGGGTTCC GTCCTCCGGG TCTCTCCCAC GCCCATGCCC
ACGGACATGA CCTCCGAGTC GCCCACGGAC ATGACCTCCG AGTCGCCCGG CGCCATGACC
AAACCGTTCG GCCCGGGCTG CTCCTCCCTG CCCACCACCG GTGAGGGCAG CCCGGAGAAC
ATGGCCAAGG AGCCGGTCGC CACCGCGGCG TCCTACAACA CGCAGCTGTC CACCCTGACC
GAGGCCATCA AGAAGGCCGG GCTGGTCGAC ACCCTGAACT CCGCCAAGGA GATCACGGTG
TTCGCCCCCA CCAACGAGGC GTTCAGCAAG ATCCCGAAGG AGATGCTCGA CAAGGTCCTG
GCTGACAAGG CGCAGCTCAC CAAGATCCTG ACCTACCACG TCGTCGAGGG GAGGAAGGCC
CCCGCAGAGC TCACCGACGC GACGCTCAGC ACGCTCGCGG GCGGCACGCT GACCGTCAAG
GGCTCCGGTG AGGACTACAC CGTCAACGAC GAGGCCAAGG TCCTGTGCGG CAACATCCAG
ACCGCCAACG CCACCGTCTA CCTGATCGAC GCGGTCCTGC TGCCCACCGC CGGAGCGACA
CCGAGCTGA
 
Protein sequence
MKKTSLLASA LTVLALAAAP AAAQSVTTGS VLRVSPTPMP TDMTSESPTD MTSESPGAMT 
KPFGPGCSSL PTTGEGSPEN MAKEPVATAA SYNTQLSTLT EAIKKAGLVD TLNSAKEITV
FAPTNEAFSK IPKEMLDKVL ADKAQLTKIL TYHVVEGRKA PAELTDATLS TLAGGTLTVK
GSGEDYTVND EAKVLCGNIQ TANATVYLID AVLLPTAGAT PS