Gene Sros_5623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5623 
Symbol 
ID8668917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6160360 
End bp6160902 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003341118 
Protein GI271966922 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.118423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.282365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGACG TGGTGGACGA CACCAGGACC CGGCTGGTCG AGAGCGCGCT GCGCCTGTTG 
CGCGAGGAGG GCCTCGACGC GGTGACGCTG CGCGCGGTCG GCGACCTGAC CGGCCTGTCG
CGGATGGCCC CCTACCGGCA CTTCGCCGAC AAGACCGCGC TGCTCGCCGC GCTCGCGGTC
CGGGTCATCG TCGATCTGAG CGCGCACGTC GCCGGAGCGG TCCTGGAGGG AGCCGACCGC
CGGGAGCGGC TGCGGGCCTT CTACACCAGC TACGTCGAGT ACGCCATGGA GCACCGCAAC
GAATACCGGC TCGTGTTCGC CTCGGAGTTC CTCATCGGCC ACCACCCGGA GCTGGAGAGG
GCGATCGACG ACGTGATGAC CGCACTCGGC CTGAAGACCT CCGGCGGCCA GGCCGCCTCC
AAGGCGGGGG CGATGGCCCT GCTGTCCACC GCCCACGGCC TCGCCGAGCT CGCCACGGCC
GGGCACTTCG CCCAGAAGGG GATCAGCTAC GAGGATGTCA TCGACGTGCT CGTGGCGCCC
TGA
 
Protein sequence
MGDVVDDTRT RLVESALRLL REEGLDAVTL RAVGDLTGLS RMAPYRHFAD KTALLAALAV 
RVIVDLSAHV AGAVLEGADR RERLRAFYTS YVEYAMEHRN EYRLVFASEF LIGHHPELER
AIDDVMTALG LKTSGGQAAS KAGAMALLST AHGLAELATA GHFAQKGISY EDVIDVLVAP