Gene Sros_5609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5609 
Symbol 
ID8668903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6143730 
End bp6144638 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content73% 
IMG OID 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_003341104 
Protein GI271966908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.681734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.218359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGC GGGAAGCGGA AGCGATCTGG ATGGACGGTG CGCTGGTCCC CTGGGGCGAG 
GCGCGCGTCC ACGTGCTGTC GCACGCGCTG CACTACGGAA CCGCCGTGCT CGAAGGCACC
AGGACCCACG ACACGCCCGA CGGGCCCGCG GTCTTCCGGC TCGACGCGCA CCTCGACAGG
CTCTACCGGA GCGCCAGGAT CATCGGTCTG GACATCCCCT ACGCGCCCGC CGAGCTCCGT
GCGGCCACCC TGGAGACGGT CGCGGCCAAC GGCCACTCCT CCTGCTACAT CCGACACCTC
GTCCACCGGG GCTACGGTGA GATGGGCGTC GCGGCCCGCG GCTGCCCGGT CACCGTCTCG
ATCGCCACCT GGGAGTGGGA GGCGCTGCTC GGTGAGGGGG TGCGCCTGAT GACCAGCTCC
TGGCGGCGCA ACGACCCGGC GGTCGTGCCG ACGTCCGCCA AGGCGACGGG CCCCTACCTC
AACTCGGTCC TGGCCAAGGC CGAGGCGCTC GACGCCGGAT TCGACGAGGC GGTGCTGCTC
AACGCGGCGG GCTACGTCAG CGAGTGCACG GCGGCCAACG TCTTCACGGT CCGCGACGGA
GTGCTGTCGA CCCCGCCCTC CAGCGCGGGA GCACTGGAGG GCATCACCCA GGACACGGTC
GAGCGGCTCG GCGCCGACCT CGGCCTGCCG GTGCTCAGGC GCGACCTGCT CCGCGCGGAC
CTCTACACGG CCGACGAGAT GTTCCTGTGC GGGACGGCGG CCGGGATCGT GCCGGTCCGC
TCCGTCGACA ACCGCGAGCT CGGCGGTCCG GGCCCGGTCA CGGCCAAGCT CATCGACGTC
TACGACGCCG CCGTCCACGG CCGCGACGAC CGCTACCGCC ACTGGCTGAC CCCCGCCGGC
CCCCGCTGA
 
Protein sequence
MALREAEAIW MDGALVPWGE ARVHVLSHAL HYGTAVLEGT RTHDTPDGPA VFRLDAHLDR 
LYRSARIIGL DIPYAPAELR AATLETVAAN GHSSCYIRHL VHRGYGEMGV AARGCPVTVS
IATWEWEALL GEGVRLMTSS WRRNDPAVVP TSAKATGPYL NSVLAKAEAL DAGFDEAVLL
NAAGYVSECT AANVFTVRDG VLSTPPSSAG ALEGITQDTV ERLGADLGLP VLRRDLLRAD
LYTADEMFLC GTAAGIVPVR SVDNRELGGP GPVTAKLIDV YDAAVHGRDD RYRHWLTPAG
PR