Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5589 |
Symbol | |
ID | 8668883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 6119120 |
End bp | 6120661 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | extracellular solute-binding protein |
Protein accession | YP_003341084 |
Protein GI | 271966888 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.333853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTCCC TGAACCGCCG TGCCTTCCTC GGCACCACCG CCGGGCTGTC CGCCGCCCTG CTCGCCGGAT GCGGTCCCGG TCCCGCGACC GGGACCGCCG CCACGGGCCG GCCACGCAGG GGCGGCCGGC TGCGCGTCGC GTTCGCCGGA GGCGGGGCCC AGGAGACCCT GGACCCGCAC CTGTCCAACC TGTTCGTCGA GGCCTCGCGG TCGAAGGCGC TGTTCGACAA GCTCGCCGAC TACGGCCCCG ACCTGTCGGT CCAGCCCCGT CTCGCCGAAC GCTGGGAGCC CGACGCCGCC CTCACCACGT GGCGGGTCAC CCTCCGCCAG GCCGCCTTCC ACGACGGAAG GCCGGTACGG GCCGCCGACG TCCTGTACAG CTACGCCCGG ATCGGCGACC CCGCCCGCGC CTTCCGCGCC AGGACCACCC TGGCGGTGAT CGACCTGGCC CGCAGCAGGG CCGTCGACGA CCGCACCGTG GAGTTCGCGC TCAGGCAGCC GTTCGCCGAG TTCCCGAACG TGCTGGCCGC CTTCGGCGTG TTCATCGTCC CGGAGGGCAC CGAGGACTTC ACCCGGCCCG TCGGCTCCGG CCCGTTCGTC TTCGGCTCCT TCGAGCCGGG CCGCTCCCTG CTGCTCAGGC GCAACCCCGA CTACTGGGAG GGCGCGCCCC ACGTCGACGA ACTGCAGTAC CTGATCGCCA ACGAGGAGTC GGCCCGCGTC AACGCGCTGC TCGGCGGGCA GGTCGACTAC GCCCACGACA TCACCGCGAC CACCGCCCGG ACCTATCGGG GCAACGACCG CCTGGCCGTC ACGCGGCTCA CCAACAGCGG CATGCAGGCC TTCGCCATGA AACTGGACCG GCCGCCCTTC GACGATCGCG ACCTGCGCGA GGCCATGTTC CTGCTGGCCG ACCGGGAGCA GCTGGTCGAC ACCGTGCTGG GCGGCGCCGG GCAGACGGGC AACGACCTGT TCGGCAGGGG ATACCAGTAC TACGCCGAGG AGATACCGCA GCGCGCCCGG GACCTCGACA GGGCGCAGTG GCTGGTGAGA AAGGCCGGCG CGAAGGGGCT GCGGATACGG CTCGACACGT CCGCGGCGGC CGGCGGCTTC GTGGAGTCCG CGAGCGTCTT CGCCGACCAG ATGCGGCAGG CCGGGCTCGA CGTCAGGGTC GCCGTGGGCG ACAAGGACAC CTACTGGAAG GACGTCCTCG ACGGGGGCAG CCTGTGCTGC TTCCGCTCCG GTGCGATGCC CATCGAGTCC CACTTCTCGC AGCGCCTGCT CAGCACGTCC ACCACCAACA TCACCAAGTG GAGGCGCCCG GAGTTCGACG CCCTCTACAC CAGAGCCGTC TCGCTCGCCG ACGAGAAGGC GCGCCGCGAC GTGTACGCCG AGATGCAGCG CATGCAGCAC GCCGAGGGCG GCTACCTCGT CTGGGGTTTC GCCGACTGGC TCGTCGCGAC CGCGCCGGGG GTGGGCGGCG TCGTCGACGC CCCGGCCAAC ACCCTGGACT GGGCCCGATT CGACAAGGTC TGGCTGGCGT GA
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Protein sequence | MHSLNRRAFL GTTAGLSAAL LAGCGPGPAT GTAATGRPRR GGRLRVAFAG GGAQETLDPH LSNLFVEASR SKALFDKLAD YGPDLSVQPR LAERWEPDAA LTTWRVTLRQ AAFHDGRPVR AADVLYSYAR IGDPARAFRA RTTLAVIDLA RSRAVDDRTV EFALRQPFAE FPNVLAAFGV FIVPEGTEDF TRPVGSGPFV FGSFEPGRSL LLRRNPDYWE GAPHVDELQY LIANEESARV NALLGGQVDY AHDITATTAR TYRGNDRLAV TRLTNSGMQA FAMKLDRPPF DDRDLREAMF LLADREQLVD TVLGGAGQTG NDLFGRGYQY YAEEIPQRAR DLDRAQWLVR KAGAKGLRIR LDTSAAAGGF VESASVFADQ MRQAGLDVRV AVGDKDTYWK DVLDGGSLCC FRSGAMPIES HFSQRLLSTS TTNITKWRRP EFDALYTRAV SLADEKARRD VYAEMQRMQH AEGGYLVWGF ADWLVATAPG VGGVVDAPAN TLDWARFDKV WLA
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