Gene Sros_5552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5552 
Symbol 
ID8668846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6073311 
End bp6074222 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative transcriptional regulator protein, LysR family 
Protein accessionYP_003341048 
Protein GI271966852 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.409042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAGCA GTCACCGCCT GCGGGTGCTT CTTGAGGTCT TCAGGACGGG GAGTATCGCG 
GGAGCCGCGC GTATCCTGCG GCTCTCGCCG TCCGCCGTGT CCCACCAGCT CTCCAAACTG
GAGGAGGAGG CCGGGGTGGG CCTGGTCGAG CGGGGCGCGC AGAGCCTGCG GCTGACCGCG
GCCGGGCGGC GGCTCGCGAC CCGGGCCCAG GAGGTGCTCG ACATCATCGA GGCCGCGGAG
AAGGACCTGC TGGCGCAGGC CAGGGCCGAC GCCGGGCAGC TCCGGATCGG GTTCTTCGCC
TCGGCGGGAT ACCGGCTGCT GCCGCTGGCG CTGTCGACCT TCACCGCCCG CCACCCCGCC
GTGGAGCTCG ACCTGGTGCT CGGCCAGCCG CACGAGCTCC TGCCCGACCT GGAGCGGGGC
GCGCTCGACA TCCTGGTGGT CTTCGAGCAC GCGCTCGACC CCTGGAAGCC GCCGGAGGGG
GTCGAGGTCG CCCACCTGTT CGACGAGCCG CAACTCCTGG TCGTGCCGTC GGGCCATCCG
GCGGGGCAGC GGCAGCGGGT ACGGCTCGCC GACCTGGCCG ACGAGCCGTG GATCACCACG
TACGGCACCG ACACGCCGGT GTCGGTGTTG GAACGGGCCA GCGCGCTGGA GGGGTTCAAT
CCGATGATCC GCTGCCGCAG CGACCACTAC GAGGTCACGC TCGGGCTGGT CAGGGCGGGC
CTGGGGGTGG CCCTGGTGCC CAGCCTCGGC GCGCAGGGCG CGGCGGGCAT CCAGGTGTGC
CGGCTGGACG GCCCCCGCCT CTTCCGCAGG ATCGGCGCCG CCGTCCGCCC GACCAACCCC
AACCCGGCAC TGCGCTCCTT CATCGACTAC CTGCGCGACG CCTCGGCCCA GATGCGCAAC
GCCCTGCGCT GA
 
Protein sequence
MLSSHRLRVL LEVFRTGSIA GAARILRLSP SAVSHQLSKL EEEAGVGLVE RGAQSLRLTA 
AGRRLATRAQ EVLDIIEAAE KDLLAQARAD AGQLRIGFFA SAGYRLLPLA LSTFTARHPA
VELDLVLGQP HELLPDLERG ALDILVVFEH ALDPWKPPEG VEVAHLFDEP QLLVVPSGHP
AGQRQRVRLA DLADEPWITT YGTDTPVSVL ERASALEGFN PMIRCRSDHY EVTLGLVRAG
LGVALVPSLG AQGAAGIQVC RLDGPRLFRR IGAAVRPTNP NPALRSFIDY LRDASAQMRN
ALR