Gene Sros_5550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5550 
Symbol 
ID8668844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6071086 
End bp6071994 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content71% 
IMG OID 
Productmembrane protein-like protein 
Protein accessionYP_003341046 
Protein GI271966850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.989573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0897553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCA CGGGATTCAC TGGGCGGGTC GCGGCGTTGT GGACCGGGGC CCGCCACCGC 
CACCGCTGGC TGGACCATCT GGTCCGCGCC GGCGCGCGCT ACGACCAGGC GGACGGTGGA
CGGCTGTCGG CCGCTCTCAC CTACTACGCG TTCTTCGCGC TGTTCGCGCT CGCGCTGCTG
AGCTTTTCGA TCATCGGGCA CGTCCTGGAC GATCCCCAGG TGATACGGAC CGTGCAGCGG
TATCTCACCG ACAACTTCCC CCGCCTCGAC GTGCAGGCGC TGCGTGACGC CAGGAGCACG
GCCGGGGTGA TCGCCTTCAT CGGCCTGCCG ATCACCGGCC TGTTCTGGAT GGACACCCTG
CGGTCGGCGA TCAGGGCGAT CTGGCGCATA GAGGAGTATC CGGGCCGCTT CCTGCTGCGC
CAGCTCATCG ACCTGGGCGT GCTGGCCGGG CTCGGGGCGC TGCTGTCGGC CTCCCTCGCG
GTGGCCTTCG CCGCCGAGTC GCTGCTGAAC TGGCTGCTGG TGCACACCGT GGGCGTCGAC
GACACCCCGA CGCAGTGGCT GCTGGCCGCG GTCGCGTTCG TGCTCGGTCT CGGCGTGAAC
ACCCTGCTGG CGGTCGCCCT GCTCACCGCG CCCCCGAGGC TGCGGCTGCC GCCACGCCGG
GTGCTCGGGC CCGCCCTGTT CATCAGCCTC GGGCTGGAGG TCCTCAAGAC GATCGGCCAG
TTCTATCTGG AGATCACCGC GGCCAACCCT GCCTACCAGG TCGTGGCCGG CGCCGTCGCG
CTGCTCGCCT TCCTCAAGCT CCTCAACCAG CTCATCCTGT TCGCCGCCGC GCTCACCGCC
ACCGCCACCA CCGGCGACAT CGTCGACCTG GCCGTCCGCC GCCCGCCCGC GCCGGCCGCC
TTGACGTGA
 
Protein sequence
MTVTGFTGRV AALWTGARHR HRWLDHLVRA GARYDQADGG RLSAALTYYA FFALFALALL 
SFSIIGHVLD DPQVIRTVQR YLTDNFPRLD VQALRDARST AGVIAFIGLP ITGLFWMDTL
RSAIRAIWRI EEYPGRFLLR QLIDLGVLAG LGALLSASLA VAFAAESLLN WLLVHTVGVD
DTPTQWLLAA VAFVLGLGVN TLLAVALLTA PPRLRLPPRR VLGPALFISL GLEVLKTIGQ
FYLEITAANP AYQVVAGAVA LLAFLKLLNQ LILFAAALTA TATTGDIVDL AVRRPPAPAA
LT