Gene Sros_5541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5541 
Symbol 
ID8668835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6061513 
End bp6062175 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341038 
Protein GI271966842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.418646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTA CCGGGCATGG CCCCCTGTCA CCCACGGCAC GCAGCACCGT ACGCCGCTAC 
CACGAGCGCG CCGCGACCGA CCGTCAGGCT CTGTACGACG TGCTGGACGC CGGGCTCGTC
TGCCACCTGG GGTTCGTCGC GGACGGCGGA CCTGTCGTGC TGCCCAGCGT GTACGGCCGC
GAGGGCGACA CGCTGTACCT GCACGCATCG GCTGGCGCCC GCAGCGCGCG CGTCCTCGCC
CCCGGAGCGC CGATATGCGT GACGGTGACC CATCTCGATG CCATCGTCTA CGCGCGCTCG
GTCTACCACA ACTCTGTGAA CTACCGCTCG GCCGTCGTCC ACGGAACCGG CCGGCTCCTG
CGCGAGGAGG AGAAGCGGCA CGGCATGCGG GTCGTGGCCG AGCATCTCGC GCCGGGCGCG
TGGGACTACG GGCACGAACC GGACCGCAAG GTGCTGGCCC GGGTCGCCGT CATGACCCTG
GACCTGGCCG AGGCGTCGGT GAAGATCCGC GACGCGCCGC CCAATGATCA CGGCGACCAG
GTCGACCTGG ACAAGTGGGC CGGTCTGCTG CCGGTGCGCA CGTCCTTCGG CGTCCCCGAG
CCTGAGGCGC GGGTGCCCGA CGGGCTGCCG GTGCCGGAGC ACATCCGCTC CCGCCGGATG
TGA
 
Protein sequence
MNSTGHGPLS PTARSTVRRY HERAATDRQA LYDVLDAGLV CHLGFVADGG PVVLPSVYGR 
EGDTLYLHAS AGARSARVLA PGAPICVTVT HLDAIVYARS VYHNSVNYRS AVVHGTGRLL
REEEKRHGMR VVAEHLAPGA WDYGHEPDRK VLARVAVMTL DLAEASVKIR DAPPNDHGDQ
VDLDKWAGLL PVRTSFGVPE PEARVPDGLP VPEHIRSRRM