Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5522 |
Symbol | |
ID | 8668816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 6040163 |
End bp | 6040606 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | IS element transposase |
Protein accession | YP_003341020 |
Protein GI | 271966824 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00194364 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.432727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAG ATGAAGACAT CAGGACTGGT AGGCATTGTG TTTTCGTCCT GCATGCCCAT TTGGTCTTTC TGACGAAATA TCAGCGCGAT GTGTTCGCCG ACAGGCATCT GGAGCGCATG GAAGAGATCA TGCGGGACGT GTGCGCCGAC TTCGGAGCCG AGCTTCGCGA GTTCGACGGC GCCGGCAGCC ACGTCCACCT GCTGGTGAGC TTCCCGCCGA AGGTCGCCCT GTCCAAGCTC GTCAACAGCC TCAAGGGCGT TTCCTCCCGG CGGATGCGCC AGGAATTCCC CGAGCTCGCC GCGCACTACT ACCGGGCCAG CCGTCTCTGG TCGGGCTCCT ACTTCGCCGG GAGCCTCGCC GGAGCCCCCG TCGCGGAGCT CCGCGAGTAC GTCGAGCGGC AGAACCGGCC CGCTCGGGGC GCGCCCCAGA GGGTGTCCCT GTGA
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Protein sequence | MTEDEDIRTG RHCVFVLHAH LVFLTKYQRD VFADRHLERM EEIMRDVCAD FGAELREFDG AGSHVHLLVS FPPKVALSKL VNSLKGVSSR RMRQEFPELA AHYYRASRLW SGSYFAGSLA GAPVAELREY VERQNRPARG APQRVSL
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