Gene Sros_5522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5522 
Symbol 
ID8668816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6040163 
End bp6040606 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content65% 
IMG OID 
ProductIS element transposase 
Protein accessionYP_003341020 
Protein GI271966824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00194364 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.432727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG ATGAAGACAT CAGGACTGGT AGGCATTGTG TTTTCGTCCT GCATGCCCAT 
TTGGTCTTTC TGACGAAATA TCAGCGCGAT GTGTTCGCCG ACAGGCATCT GGAGCGCATG
GAAGAGATCA TGCGGGACGT GTGCGCCGAC TTCGGAGCCG AGCTTCGCGA GTTCGACGGC
GCCGGCAGCC ACGTCCACCT GCTGGTGAGC TTCCCGCCGA AGGTCGCCCT GTCCAAGCTC
GTCAACAGCC TCAAGGGCGT TTCCTCCCGG CGGATGCGCC AGGAATTCCC CGAGCTCGCC
GCGCACTACT ACCGGGCCAG CCGTCTCTGG TCGGGCTCCT ACTTCGCCGG GAGCCTCGCC
GGAGCCCCCG TCGCGGAGCT CCGCGAGTAC GTCGAGCGGC AGAACCGGCC CGCTCGGGGC
GCGCCCCAGA GGGTGTCCCT GTGA
 
Protein sequence
MTEDEDIRTG RHCVFVLHAH LVFLTKYQRD VFADRHLERM EEIMRDVCAD FGAELREFDG 
AGSHVHLLVS FPPKVALSKL VNSLKGVSSR RMRQEFPELA AHYYRASRLW SGSYFAGSLA
GAPVAELREY VERQNRPARG APQRVSL