| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5513 |
|---|
| Symbol | |
|---|
| ID | 8668807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 6031039 |
|---|
| End bp | 6031602 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | putative RNA 2'-phosphotransferase |
|---|
| Protein accession | YP_003341012 |
|---|
| Protein GI | 271966816 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0209017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.426807 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGAA GAAGGCTCAT CCACGTCTCC AAATTTCTCT CCAGGCACCT GCGCCACCAG
CCCGGACGCA TCGGGCTGAC CCTCGATCCG CAGGGCTGGA CGGAGATCGA CGCCGTGCTG
GCGGCCGCCG CGCGGCACGG CGTCGTGATC ACCCGCGACG AGCTCGCCCA GGTGGTCGCC
CGCAACGACA AGCAGCGCTT CGCCGTCGAC GGCGACCGGA TCCGCGCCAA CCAGGGACAC
TCCGTCGCCG TCGACCTGGA CCTTCCGGTG GCCGAGCCGC CGGCGTTCCT CTTCCACGGC
ACCGTGGGCA GCCGGGTCGC GGCCATCCGG GAGGAGGGGC TGCGGCCGAT GAGCCGGCAC
GCCGTGCATC TGTCCCCCGA CCGTGAGACG GCGACACGTG TGGGGGCGCG GCGTGGCAGG
CCGGTCGTCC TGGTGGTGCG CGCGGGGGAC ATGCACCGGG CGGGCCACGA GTTCCGGATC
AGTGCCAACG GGGTCTGGCT CGTCGCCCAC GTCCCGCCCG CCTACATCAC GCCGGGCGAC
AGACCACCTG CGCCAGGGCG GTGA
|
|---|
| Protein sequence | MDGRRLIHVS KFLSRHLRHQ PGRIGLTLDP QGWTEIDAVL AAAARHGVVI TRDELAQVVA
RNDKQRFAVD GDRIRANQGH SVAVDLDLPV AEPPAFLFHG TVGSRVAAIR EEGLRPMSRH
AVHLSPDRET ATRVGARRGR PVVLVVRAGD MHRAGHEFRI SANGVWLVAH VPPAYITPGD
RPPAPGR
|
|---|
| |