Gene Sros_5510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5510 
Symbol 
ID8668804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6028667 
End bp6029326 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341009 
Protein GI271966813 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.325809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.24257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATAG TCATCGCGGG TGGACACGGG AAGATCGCTC TGCGGCTGGA GCGGCTGCTC 
GCCGGACGTG GCGACGAGCC GGTCGGGCTG ATCCGCAGGC CCGAGCACGA GCCGGACATC
CGGGTCACCG GAGCTCGGGC CGTCCTGTGC GATCTGGAGC AGGCCTCGGT GGAGGAGGTG
GCCGCTCATC TGGACGGGGC CGACGCGGTG GTGTTCGCCG CCGGGGCGGG GCCGAACAGC
GGCGCGGCCC GCAAGGTCAC CGTCGACCGC GGGGCCTCGG TCCTGCTGGC CGACGCGGCC
GAGCGCGCCG GGGTCCGCCG GTTCGTCCAG ATCTCGTCCA TGGGTGCAGG CAAGCCGCCG
GAGCCGGGCG GCGACGAGGT CTGGGCGGCC TACATCACGG CCAAGACCGA GGCGGAGGAC
GACCTGCGCG GCCGCGACCT GGACTGGACG ATACTCCGCC CCGGAGCTCT GACCGACGCT
CCCGGAACGG CTCTGGTCAC TCTCTCCGAT CCGCCGGTGC CTCCGGGTCA GGTGCCTCGC
GACGACGTCG CCGCGGTGAT CACCGCGCTG CTGGACACCT CCGCGGGCCA CCACCGCACC
CTGGAGCTCA TCAGCGGCGA CATCCCCATC GAGACGGCTG TCCGGTCCCT GGGCTCATGA
 
Protein sequence
MRIVIAGGHG KIALRLERLL AGRGDEPVGL IRRPEHEPDI RVTGARAVLC DLEQASVEEV 
AAHLDGADAV VFAAGAGPNS GAARKVTVDR GASVLLADAA ERAGVRRFVQ ISSMGAGKPP
EPGGDEVWAA YITAKTEAED DLRGRDLDWT ILRPGALTDA PGTALVTLSD PPVPPGQVPR
DDVAAVITAL LDTSAGHHRT LELISGDIPI ETAVRSLGS