Gene Sros_5491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5491 
Symbol 
ID8668785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6009445 
End bp6010494 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content74% 
IMG OID 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003340990 
Protein GI271966794 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.032419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTAG TAGTCGTCGG GGCGACCGGG AACGTGGGCA CGAGCGTGGT GTCCGCCCTC 
GTGTCCGACC AGAACATCAC CTCCGTCGTG GGCCTGGCCC GGCGGCTGCC GGACTGGCGG
CCGGACAGGA CCACCTGGCA CGCCGTGGAC GTCGGCACCG GCGACCTGGA GCCGTATCTC
GCCGGCGCCG ACGCGGTGGT GCACCTGGCG TGGCTGTTCC AGCCCACGCG CGACCCGGTG
ACGACCTGGC GGACCAACGT CCTGGGCAGC ACGCGGGTCT TCGAGGCCGC CGCGCGGCAC
AACGTCCCCG TGGTGGTCCA CGCCTCGTCG GTGGGCGCCT ACTCCCCCGG CCCGAAGGAC
CGGCCGGTCA CCGAGGACTG GCCCACCCAC GGCTGGCCGG GGGCCGCCTA CGGCCGGGAG
AAGGCGTACG TGGAACGCGT GCTCGACGTG TTCGAGCGGG ACCACCCCGA CACCCGGGTC
GTGCGGCTGC GGCCGGGCTT CATCTTCAAG CGGGAGGCGG CGACCGAGCA GCGCCGGCTG
TTCGGGGGCC CGTTCGTGCC CCAGCGGCTG GTACGGCCGA GCATGATCCC CATCGTCCCC
GACACCCCCG GGCTCAAGTT CCAGGCGGTC CACGCCGAGG ACGTCGGCGA GGCCTACCGC
CTGGCGGTCA CCCGGCCGGT GTCGGGCGCC TTCAACATCG CCGCCGATCC CGTGATCGAA
CCGTCCGTAC TGGCCGAGCT GCTCGGCGCC CGCCTGGTGC CCGTCTCCGG CTGGATGCTC
AGGAGTGCCG CCGCCCTGGC CTGGCACATG CGTCTGATCC CCGCCGCGCC CGGCCTGGTC
GACCTGGTGC TCAAGCTGCC GATCATGGAT GTCACCCGTG CCCGTACCGA GCTCGGCTGG
CAGCCGCGCC GTACGGCGGT CGACGCCCTG AAGGAGCTGC TGGAGGGCCT GCGCACCTCC
GCGGGCATGG ACACCCCGCC CCTGTCGCCC GGCGCCGGCG GTCCCGCGCG GGCCGGTGAG
CTGGCGAGCG GGGTCGGAGG CCGGCCGTAG
 
Protein sequence
MRVVVVGATG NVGTSVVSAL VSDQNITSVV GLARRLPDWR PDRTTWHAVD VGTGDLEPYL 
AGADAVVHLA WLFQPTRDPV TTWRTNVLGS TRVFEAAARH NVPVVVHASS VGAYSPGPKD
RPVTEDWPTH GWPGAAYGRE KAYVERVLDV FERDHPDTRV VRLRPGFIFK REAATEQRRL
FGGPFVPQRL VRPSMIPIVP DTPGLKFQAV HAEDVGEAYR LAVTRPVSGA FNIAADPVIE
PSVLAELLGA RLVPVSGWML RSAAALAWHM RLIPAAPGLV DLVLKLPIMD VTRARTELGW
QPRRTAVDAL KELLEGLRTS AGMDTPPLSP GAGGPARAGE LASGVGGRP