Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5491 |
Symbol | |
ID | 8668785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 6009445 |
End bp | 6010494 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003340990 |
Protein GI | 271966794 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.032419 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGTAG TAGTCGTCGG GGCGACCGGG AACGTGGGCA CGAGCGTGGT GTCCGCCCTC GTGTCCGACC AGAACATCAC CTCCGTCGTG GGCCTGGCCC GGCGGCTGCC GGACTGGCGG CCGGACAGGA CCACCTGGCA CGCCGTGGAC GTCGGCACCG GCGACCTGGA GCCGTATCTC GCCGGCGCCG ACGCGGTGGT GCACCTGGCG TGGCTGTTCC AGCCCACGCG CGACCCGGTG ACGACCTGGC GGACCAACGT CCTGGGCAGC ACGCGGGTCT TCGAGGCCGC CGCGCGGCAC AACGTCCCCG TGGTGGTCCA CGCCTCGTCG GTGGGCGCCT ACTCCCCCGG CCCGAAGGAC CGGCCGGTCA CCGAGGACTG GCCCACCCAC GGCTGGCCGG GGGCCGCCTA CGGCCGGGAG AAGGCGTACG TGGAACGCGT GCTCGACGTG TTCGAGCGGG ACCACCCCGA CACCCGGGTC GTGCGGCTGC GGCCGGGCTT CATCTTCAAG CGGGAGGCGG CGACCGAGCA GCGCCGGCTG TTCGGGGGCC CGTTCGTGCC CCAGCGGCTG GTACGGCCGA GCATGATCCC CATCGTCCCC GACACCCCCG GGCTCAAGTT CCAGGCGGTC CACGCCGAGG ACGTCGGCGA GGCCTACCGC CTGGCGGTCA CCCGGCCGGT GTCGGGCGCC TTCAACATCG CCGCCGATCC CGTGATCGAA CCGTCCGTAC TGGCCGAGCT GCTCGGCGCC CGCCTGGTGC CCGTCTCCGG CTGGATGCTC AGGAGTGCCG CCGCCCTGGC CTGGCACATG CGTCTGATCC CCGCCGCGCC CGGCCTGGTC GACCTGGTGC TCAAGCTGCC GATCATGGAT GTCACCCGTG CCCGTACCGA GCTCGGCTGG CAGCCGCGCC GTACGGCGGT CGACGCCCTG AAGGAGCTGC TGGAGGGCCT GCGCACCTCC GCGGGCATGG ACACCCCGCC CCTGTCGCCC GGCGCCGGCG GTCCCGCGCG GGCCGGTGAG CTGGCGAGCG GGGTCGGAGG CCGGCCGTAG
|
Protein sequence | MRVVVVGATG NVGTSVVSAL VSDQNITSVV GLARRLPDWR PDRTTWHAVD VGTGDLEPYL AGADAVVHLA WLFQPTRDPV TTWRTNVLGS TRVFEAAARH NVPVVVHASS VGAYSPGPKD RPVTEDWPTH GWPGAAYGRE KAYVERVLDV FERDHPDTRV VRLRPGFIFK REAATEQRRL FGGPFVPQRL VRPSMIPIVP DTPGLKFQAV HAEDVGEAYR LAVTRPVSGA FNIAADPVIE PSVLAELLGA RLVPVSGWML RSAAALAWHM RLIPAAPGLV DLVLKLPIMD VTRARTELGW QPRRTAVDAL KELLEGLRTS AGMDTPPLSP GAGGPARAGE LASGVGGRP
|
| |