| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5489 |
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| Symbol | |
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| ID | 8668783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptosporangium roseum DSM 43021 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013595 |
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| Strand | + |
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| Start bp | 6006810 |
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| End bp | 6007805 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_003340988 |
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| Protein GI | 271966792 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.705954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0150088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACCA CCATCGATGA CGACGTGCTG ATCCTGTCCG ACCACGACGA GGACGACCGC
TCCTCCGGTG CCGCGGCCGC GGCCGCCAGC TCCGATGCGG TCAAGGACTA CCTCCGGCGG
ATCGGCAAGG TCGCGCTGCT CTCCGCCGAG CAGGAAGTGG AGCTCGCCCG GCGCATCGAG
GCCGGGCTGT TCGCCGCCGA ATGCCTCGGC ACGCAGGCCC AGGCGCCGTC CACGGTCGTG
CGGGCGGAGC TGGAGTGGCT GGCCGAGGAC GGCCTGCGCG CCAAGAACCA CCTGCTGGAG
GCCAACCTCC GGCTGGTCGT CTCGATCGCC AAGCGCCACA CCGGCCGCGG CATGGCCTTC
GCCGACCTGA TCCAGGAGGG CAACCTCGGC CTGATCCGCG CGGCCGAGAA GTTCGACTAC
ACCAAGGGGT TCAAGTTCTC CACCTACGCC ACCTGGTGGA TCAAGCAGGC CGTCACCCGC
GCGCTGGCCG ACCAGGGGCG CACCATCCGG ATTCCGGTGC ACATGGTCGA GGTGATCAAC
AAGGTGGCCC GGGTGCAGCG GCAGATGATG GTCACCCTCG GCCGCGAGCC CAGCCCGCAG
GAGCTCGCCG TCGAGCTGGA CATGACGGTG GAGAAGATCA CCGAGGTCCA GAAGTACGGG
CGTGAGCCGA TCTCCCTGCA CACCCCCCTG GGCGCCGAGG GCGATGCCGA GTTCGGTGAC
GTGATCGAGG ACTCCGAGGC GATCCTGCCG GAGGAGGCGG TGACCTTCAT CCTGCTGCAG
CGGCAGTTGC ACGCGGTGCT GGAGGCGTTG TCCGAGCGCG AGGCCGGGGT GATGCGCCTG
CGGTTCGGGC TGGCCGACGG ACAGCCCAAG ACCCTGGACG AGATCGGCAA GGTGTTCGGC
GTCACCCGGG AGCGGATCCG CCAGATCGAG TCCAAGACCA TGTCCAAGCT GCGCCACCCG
GCCCGCGCCC GGGCGCTACG CGACTACCTG GGATGA
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| Protein sequence | MTTTIDDDVL ILSDHDEDDR SSGAAAAAAS SDAVKDYLRR IGKVALLSAE QEVELARRIE
AGLFAAECLG TQAQAPSTVV RAELEWLAED GLRAKNHLLE ANLRLVVSIA KRHTGRGMAF
ADLIQEGNLG LIRAAEKFDY TKGFKFSTYA TWWIKQAVTR ALADQGRTIR IPVHMVEVIN
KVARVQRQMM VTLGREPSPQ ELAVELDMTV EKITEVQKYG REPISLHTPL GAEGDAEFGD
VIEDSEAILP EEAVTFILLQ RQLHAVLEAL SEREAGVMRL RFGLADGQPK TLDEIGKVFG
VTRERIRQIE SKTMSKLRHP ARARALRDYL G
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