Gene Sros_5486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5486 
Symbol 
ID8668780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6005044 
End bp6005709 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content71% 
IMG OID 
Product(acyl-carrier-protein) phosphodiesterase 
Protein accessionYP_003340986 
Protein GI271966790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0125211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0147175 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCATC TGCTGCATCT GGACGCCAGT GCGCGGAGCG GCTCGTTCTC CCGCAAGCTC 
GGCGAGAGCT TCGCCGCCGA GTGGAGAGCG GCCAATCCCG AAGGGACCTA CACCTACCGC
GACCTGGTCG CGGAACCCGT GCCGCCCGTC GACGAAGCCC GTGTCCGGCT CGCCACCCAG
TCCTCCCTGA AGGGGGTGCG CGGCATCGAG GCCATGGACG AGGCGGCCGC CGCCACCTCC
GAACTGGCCG CGGCCTGGGC GGCCACCCGC CCGCTGGTGG AGCAACTGCT CGCGGCGGAC
GTCCTGCTCG TCGGCGCCCC CATGTACAAC TTCTCGGTGC CCGCCGCCCT CAAGGCATGG
ATCGACCGCG TGGCCCTGCC GTGGTTGCCG CTCGGGGGAA AGTCGGCCGT GATATTGAGC
GCGCGCGGCG GCGCCTACGG ACCGGGCACC CCCCGGGAGC CCTTCGACTT CCAGGAGCCT
TACCTGCGCG CCTTCTTCTC CTCGCTCGGA TTGGACGACG TGGAGTTCGT CCACACCGAG
CTCACCCACG CCGGGGTCAT GCCCTTCCTC GTCCAGTTCC GCGAGACGCA CGAGGCGTCC
CAGGCCGCGG CGCTCGACGC GGTGCACACC CTGGCCACCC GTGTGCGTGC CAGGACGCCT
TCTTGA
 
Protein sequence
MTHLLHLDAS ARSGSFSRKL GESFAAEWRA ANPEGTYTYR DLVAEPVPPV DEARVRLATQ 
SSLKGVRGIE AMDEAAAATS ELAAAWAATR PLVEQLLAAD VLLVGAPMYN FSVPAALKAW
IDRVALPWLP LGGKSAVILS ARGGAYGPGT PREPFDFQEP YLRAFFSSLG LDDVEFVHTE
LTHAGVMPFL VQFRETHEAS QAAALDAVHT LATRVRARTP S