Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5486 |
Symbol | |
ID | 8668780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 6005044 |
End bp | 6005709 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | (acyl-carrier-protein) phosphodiesterase |
Protein accession | YP_003340986 |
Protein GI | 271966790 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0125211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0147175 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCATC TGCTGCATCT GGACGCCAGT GCGCGGAGCG GCTCGTTCTC CCGCAAGCTC GGCGAGAGCT TCGCCGCCGA GTGGAGAGCG GCCAATCCCG AAGGGACCTA CACCTACCGC GACCTGGTCG CGGAACCCGT GCCGCCCGTC GACGAAGCCC GTGTCCGGCT CGCCACCCAG TCCTCCCTGA AGGGGGTGCG CGGCATCGAG GCCATGGACG AGGCGGCCGC CGCCACCTCC GAACTGGCCG CGGCCTGGGC GGCCACCCGC CCGCTGGTGG AGCAACTGCT CGCGGCGGAC GTCCTGCTCG TCGGCGCCCC CATGTACAAC TTCTCGGTGC CCGCCGCCCT CAAGGCATGG ATCGACCGCG TGGCCCTGCC GTGGTTGCCG CTCGGGGGAA AGTCGGCCGT GATATTGAGC GCGCGCGGCG GCGCCTACGG ACCGGGCACC CCCCGGGAGC CCTTCGACTT CCAGGAGCCT TACCTGCGCG CCTTCTTCTC CTCGCTCGGA TTGGACGACG TGGAGTTCGT CCACACCGAG CTCACCCACG CCGGGGTCAT GCCCTTCCTC GTCCAGTTCC GCGAGACGCA CGAGGCGTCC CAGGCCGCGG CGCTCGACGC GGTGCACACC CTGGCCACCC GTGTGCGTGC CAGGACGCCT TCTTGA
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Protein sequence | MTHLLHLDAS ARSGSFSRKL GESFAAEWRA ANPEGTYTYR DLVAEPVPPV DEARVRLATQ SSLKGVRGIE AMDEAAAATS ELAAAWAATR PLVEQLLAAD VLLVGAPMYN FSVPAALKAW IDRVALPWLP LGGKSAVILS ARGGAYGPGT PREPFDFQEP YLRAFFSSLG LDDVEFVHTE LTHAGVMPFL VQFRETHEAS QAAALDAVHT LATRVRARTP S
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