Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5485 |
Symbol | |
ID | 8668779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 6004193 |
End bp | 6004981 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | short chain dehydrogenase/reductase |
Protein accession | YP_003340985 |
Protein GI | 271966789 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0337186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0151548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCG AACTCAGAGA CCGTGTGGTC CTGGTCACCG GCGCGTCGAC CGGGATCGGA GCCGCGACCG CCCGCGCCTA CGGGCGGGAG GGCGCCCGGG TGGCGATCAC CTACCGGAAC AATCCGGACA AGGCGGAGAA GGTCGCCGCG GACGTCGAAG CCGCAGGCGG GCAGGCGCAC GTCGTCCGGC TCGACCTCGA AGACCTGCCG ACCATCGGCC GGGCCGCCGC GACCGTCGTC GAACGCTGGG GCGGCATCGA CGTCCTCGTC GCCAACGCCG TCCGCTGGGG CGGTGACGGC CCGCCGGATC CCGGCGTCCG GTTCGAGGAC GTACCGCTGC GGGAATGGGA GGCGATGATC AACGCCAACC TGGTCGGAAC CGCGGCGTCG GTCCGCGCGG TCCTGCCCGG CATGCGCGCC AGGGGCTGGG GCCGCATCGT GCTGGTCTCC TCAAGTGTCG CGGAGGAGGG CCTGCCCGGG CCGGGCCCCT ACGGGACCGC CAAATCGGGC CTGTACGGGC TCGCCCGCAG CCTCGCCTGG AACGGTGGCC GGGACGGGAT CCTGGTCAAC GTCGTGGCCC CCGGCCTCAC CCTGACCGAC AGCCGCCCCG GCATTCCGAG GCCCGTCACC GACGCCCTCG CCGCCGCCAC GCCCAGCCGC AGGCTCTCGA ACTCCGACGA TGTGGCCAGG ATCATCGTCT TCCTGGGCTC GGGGGCCAAC GGCAACCTCA CCGGTGAGGT GATCCGGGAC GGTTCCGCCG CCGCACGCGC CCCGCACCTC GCCGGGTAG
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Protein sequence | MDTELRDRVV LVTGASTGIG AATARAYGRE GARVAITYRN NPDKAEKVAA DVEAAGGQAH VVRLDLEDLP TIGRAAATVV ERWGGIDVLV ANAVRWGGDG PPDPGVRFED VPLREWEAMI NANLVGTAAS VRAVLPGMRA RGWGRIVLVS SSVAEEGLPG PGPYGTAKSG LYGLARSLAW NGGRDGILVN VVAPGLTLTD SRPGIPRPVT DALAAATPSR RLSNSDDVAR IIVFLGSGAN GNLTGEVIRD GSAAARAPHL AG
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