Gene Sros_5485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5485 
Symbol 
ID8668779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6004193 
End bp6004981 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content74% 
IMG OID 
Productshort chain dehydrogenase/reductase 
Protein accessionYP_003340985 
Protein GI271966789 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0337186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0151548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCG AACTCAGAGA CCGTGTGGTC CTGGTCACCG GCGCGTCGAC CGGGATCGGA 
GCCGCGACCG CCCGCGCCTA CGGGCGGGAG GGCGCCCGGG TGGCGATCAC CTACCGGAAC
AATCCGGACA AGGCGGAGAA GGTCGCCGCG GACGTCGAAG CCGCAGGCGG GCAGGCGCAC
GTCGTCCGGC TCGACCTCGA AGACCTGCCG ACCATCGGCC GGGCCGCCGC GACCGTCGTC
GAACGCTGGG GCGGCATCGA CGTCCTCGTC GCCAACGCCG TCCGCTGGGG CGGTGACGGC
CCGCCGGATC CCGGCGTCCG GTTCGAGGAC GTACCGCTGC GGGAATGGGA GGCGATGATC
AACGCCAACC TGGTCGGAAC CGCGGCGTCG GTCCGCGCGG TCCTGCCCGG CATGCGCGCC
AGGGGCTGGG GCCGCATCGT GCTGGTCTCC TCAAGTGTCG CGGAGGAGGG CCTGCCCGGG
CCGGGCCCCT ACGGGACCGC CAAATCGGGC CTGTACGGGC TCGCCCGCAG CCTCGCCTGG
AACGGTGGCC GGGACGGGAT CCTGGTCAAC GTCGTGGCCC CCGGCCTCAC CCTGACCGAC
AGCCGCCCCG GCATTCCGAG GCCCGTCACC GACGCCCTCG CCGCCGCCAC GCCCAGCCGC
AGGCTCTCGA ACTCCGACGA TGTGGCCAGG ATCATCGTCT TCCTGGGCTC GGGGGCCAAC
GGCAACCTCA CCGGTGAGGT GATCCGGGAC GGTTCCGCCG CCGCACGCGC CCCGCACCTC
GCCGGGTAG
 
Protein sequence
MDTELRDRVV LVTGASTGIG AATARAYGRE GARVAITYRN NPDKAEKVAA DVEAAGGQAH 
VVRLDLEDLP TIGRAAATVV ERWGGIDVLV ANAVRWGGDG PPDPGVRFED VPLREWEAMI
NANLVGTAAS VRAVLPGMRA RGWGRIVLVS SSVAEEGLPG PGPYGTAKSG LYGLARSLAW
NGGRDGILVN VVAPGLTLTD SRPGIPRPVT DALAAATPSR RLSNSDDVAR IIVFLGSGAN
GNLTGEVIRD GSAAARAPHL AG