Gene Sros_5483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5483 
Symbol 
ID8668777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6002188 
End bp6003309 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content75% 
IMG OID 
Productmembrane protein-like protein 
Protein accessionYP_003340983 
Protein GI271966787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0296532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0295793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGC TGCTCGTCAC CGGCCTGCTG ATCGTCGCGC TGGTCACGAC GGCGGCATGG 
GCGATGCCCG CACTGGCGCG CCCAAGCCTG CCGTTCGGCG TGCGCGTCCC CCCCGGCCGC
GTCACCGACC GGGCCGTCAC CGAGCAGCGT CGCGCCTACA CGCGCCGCGT CCTGGGCCTG
GGCGCGCTCG CCGCGCTCGT CTCGCCTCCG CTGCTCATGC TCGGCGGGCC CGAACGGACG
CCGGCCCTCG TCCCGGCGGT TCTGGTACTG GCCGACGCGG TCGCCTACTA CCTGGCACAC
CGCGCGGTGC GGACGGCCAA GAGCCGTGGG AACTGGTACG CCGGAAGCCG GCAGGGCGTC
ACCACGGACA CCTCTCTACG CACCGATCCC GTGCGCGTGC CGTGGCTCTG GCTCGCTCCC
GCCGCCCTCG TCCTGGTCGC CGGCGCGGTC ACGGGGATCA CACGGTACGG CGGGCTGCCG
GCGACCCTGC CCACCCAGCG CGGGATGGGC GTGGACATCG CACAGCGCGT GAGCACCACC
CCGGCGGCCG CCTTCGCCCC CGTCCTGGTC CAGGCCGTCC TCACCTTGCT CATGCCGCTG
CTGGCCGCCG GGCTGACGCG TGCCCGCCCG GAGCTCGACG CCGCCCGACC CGCCGGGTCC
GCCCGCCGTT ACCGCGCTTA CCTGAAGGGA GTGATCAGGC TCGCCTTCGC GACCGCCGCG
TGCGCGAACC TGAGCGTGTT CCTCATCGCC CTGCAGGTCT GGGAGATCCT GCGGCCTTCG
ATGACCGTGA CCGCCGTCGC CTACCTGCCC CTGGGCGCCG CCCTGGTGGC CTGGGTCGCC
TTCGAGCTCC GCGTGGGCCA GGCCGGGCAC CGGCTCCCCC TGGAGCCCGG CGAGGAGGCC
GAAGACTCCG AGCTCGTGCA ACGCGACGAC GACCGGCACT GGCACCTCGG CGGGTTCGTC
TACGCCAACC GCGCCGATCC CGCCCTCTAC GTGCACCAGC GGGCAGGCGG CGCCAGCTGG
ACGATGAACC TCGGCCATCC CCTCACCTGG GCGGTCCTGG CGGTCGTGCT CGTCGTCGCC
CTGCTCGCCG CCGCCGGGGC CATCCCGCTG CCCGCCCGCT GA
 
Protein sequence
MTMLLVTGLL IVALVTTAAW AMPALARPSL PFGVRVPPGR VTDRAVTEQR RAYTRRVLGL 
GALAALVSPP LLMLGGPERT PALVPAVLVL ADAVAYYLAH RAVRTAKSRG NWYAGSRQGV
TTDTSLRTDP VRVPWLWLAP AALVLVAGAV TGITRYGGLP ATLPTQRGMG VDIAQRVSTT
PAAAFAPVLV QAVLTLLMPL LAAGLTRARP ELDAARPAGS ARRYRAYLKG VIRLAFATAA
CANLSVFLIA LQVWEILRPS MTVTAVAYLP LGAALVAWVA FELRVGQAGH RLPLEPGEEA
EDSELVQRDD DRHWHLGGFV YANRADPALY VHQRAGGASW TMNLGHPLTW AVLAVVLVVA
LLAAAGAIPL PAR