Gene Sros_5482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5482 
Symbol 
ID8668776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6001790 
End bp6002191 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content67% 
IMG OID 
ProductGntR family transcriptional regulator 
Protein accessionYP_003340982 
Protein GI271966786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0148324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0115562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACTGA CGCTCGATCT CGACAGCGAG GTCCCGATCT ACCAGCAGAT CCGGGACCGG 
ATCGTGGAAG CCATCGCCGA CGGCGACCTG ACGGCCGGCG CGGCCCTGCC CTCCACCCGG
CAGCTGGGCG TGGATCTGGC GATCAACTTC CACACCGTGA ACAAGGCCTA CGACCTGCTA
CGCCAGCAGG GATTCATCCG GATCAACCGC AAGAGCGGTG CCGTGGTGCG GCGCGACCGG
CTGTCCGGCC CGCCCGAAGC CGGCTTCTCC GACGAATGGC AGAGCAGGCT GCGCACGCTG
CTCGCCGAGG CCGTCGCCCA GGGGCTCTCC CCGCAGGAAG TGCAGCAACG CGCCGGTAAC
GTACTGGAGT CGTTCGCCGC ACCGAAAGGA TCAACGACAT GA
 
Protein sequence
MQLTLDLDSE VPIYQQIRDR IVEAIADGDL TAGAALPSTR QLGVDLAINF HTVNKAYDLL 
RQQGFIRINR KSGAVVRRDR LSGPPEAGFS DEWQSRLRTL LAEAVAQGLS PQEVQQRAGN
VLESFAAPKG STT