| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5479 |
|---|
| Symbol | |
|---|
| ID | 8668773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5999208 |
|---|
| End bp | 6000047 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003340979 |
|---|
| Protein GI | 271966783 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0226407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00750026 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | TTGTCTGGGA AACGCGAACA CGCAGAGCCC GCCTCCGAGG GAGGCCGCCT CAGCCTGCGA
GCCGACTGCG AGAGCTGCTT CGCGCTGTGC TGTGTCGTGC CGGCGTTCTC GGCCTCGGTG
GACTTCGCGA TCGACAAGAA GGCCGGGCAG GCCTGTCCCA ATCTGCGGCA GGACTTCCGC
TGCGGCATTC ACACCCGCCT CAGGCAGCAG GGTTTTCGGG GCTGCACCGT CTACGACTGC
TTCGGCGCCG GGCAGAAGGT CTCCCAGGTC ACCTTCGGCG GCCAGGACTG GCGGCAGTCC
CCGCAGACCG CGGAGCAGAT GTTCGAGGTG TTCCCGATCA TGCGGGACCT CCACGAGCTG
CTCTGGTATC TGACCGAGGC GCTGACGCTG CGGCCGGCCC GCCCGCTCCA CGGCGAGCTC
AGCCTCGCGC TGGAACAGAC CGAGCGCCTC ACTCACGCCA GCCCCGGCGC TCTCGTCGAA
CTGGACGTGG CGGCCCACCG GCGAGACGTC AACGCCCTGC TGCTGCGCGC GAGCGAGCTC
GTGCGAGCCG AGGTCCGGCA CAAGAAGAAG GACCGCAGAG GAGCCGACCT CATCGGCGCC
AAGCTCAAAG GCGCCGACCT CAGGGGCGCC AACCTGAGAG GGGCCTATCT CATCGGGGCC
GACCTCAGAG GCGCCGACCT GAGAATGGCC GACCTCATCG GGGCCGACTT CAGAGGCGCC
GACCTCAGGG GCGCCGACCT CACCGAGAGC ATCTTCCTCA TCCAGTCCCA GCTCGACGCG
GCGAAGGGCG ACAGCGCGAC CAGGCTGCCG CCGTCGCTCA CTCGGCCGGC GCACTGGTAG
|
|---|
| Protein sequence | MSGKREHAEP ASEGGRLSLR ADCESCFALC CVVPAFSASV DFAIDKKAGQ ACPNLRQDFR
CGIHTRLRQQ GFRGCTVYDC FGAGQKVSQV TFGGQDWRQS PQTAEQMFEV FPIMRDLHEL
LWYLTEALTL RPARPLHGEL SLALEQTERL THASPGALVE LDVAAHRRDV NALLLRASEL
VRAEVRHKKK DRRGADLIGA KLKGADLRGA NLRGAYLIGA DLRGADLRMA DLIGADFRGA
DLRGADLTES IFLIQSQLDA AKGDSATRLP PSLTRPAHW
|
|---|
| |