| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5458 |
|---|
| Symbol | |
|---|
| ID | 8668752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 5981633 |
|---|
| End bp | 5982238 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | cobalt transport protein |
|---|
| Protein accession | YP_003340958 |
|---|
| Protein GI | 271966762 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00259272 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0904003 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGGC TCGCCGGAGC CTACGTCCCG GGCGGCTCGC TGCTGCACCG TCTCCCCGCC
GGGGCCAAGC TCGCCGGGCT CGCCGCCTCG TGTACGGCGC TCCTGCTGCT GCGCCCGCCC
GTGGCGCTGG CGGGCGCCGC GGCCGTCGTG GCGCTGCTGT ACGTCGTCTC CGGGGTGGGC
GTCGCGGCGG CCTGGGCGCA GATCCGGCCC GTCCGCTGGT TCGCCGTGGC CCTGTTCGGC
ATGCAGTTGC TGTTCGTGGA CCTGCCCGGG GCGGTGTCCT CGACGCTCCG CGTCGTGCTC
GCCGTCGCCC TGGCCGGGCT GGTCACCCTC ACGACGCGCA CCGCCGCCAT GATGGCCTGC
CTGGAACGCC GCCTCTCCCC CGCCAGGCTC GTGGGCCTGG ACCCGTTCCG CCTGTCGCTG
CTGCTCTCCC TCACCCTGCG CAGCGTGCCG GTCGTCGCCG AACTGGCCTC CCGGGTCCGG
GAGGCCCAGC GCGCCAGGGG GGTGGAGCGG AGCCTACGGG CCTTCGCCGT CCCGCTGGTG
GTGAGCGTGC TGCGGCACGC GGACGCGCTG GGCGAGGCGC TCAGCGCCCG CGGCCTGGAC
GACTGA
|
|---|
| Protein sequence | MSGLAGAYVP GGSLLHRLPA GAKLAGLAAS CTALLLLRPP VALAGAAAVV ALLYVVSGVG
VAAAWAQIRP VRWFAVALFG MQLLFVDLPG AVSSTLRVVL AVALAGLVTL TTRTAAMMAC
LERRLSPARL VGLDPFRLSL LLSLTLRSVP VVAELASRVR EAQRARGVER SLRAFAVPLV
VSVLRHADAL GEALSARGLD D
|
|---|
| |