Gene Sros_5455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5455 
Symbol 
ID8668749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5978426 
End bp5979805 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content78% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340955 
Protein GI271966759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0873115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.166027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTAG CCGCACAGGT GATGCGACAC GCCTCCGACC GTCCGCACCG CCTCGCGCTG 
TGCGGTCCGG GAGGCGATCT GAGCTACGCC GGGCTCGCGG CCGGGATCAA CGGTGCCGCA
CGGCACCTGT CCGGCCGGGG GATCGGCCGC GGCGCGCTGG CCGCGATCAG CCTCGCCGAT
CCGGTGGCCC TGCTCACCGC CGTGCTGGCC GCCGACCTGG TGGGCGCCAC ACCGCTGGTG
TGCGACCCCG CCTGGGACCG GGAGCAGCGG GCGCGGGTCA TGGACGCGGT CCCCGTGGAC
ACCCGCATCA CCGTGCCGCC GCCCGGCGAG GAGGGGCCGC CGGTGCGGTC CGGCGCCTCA
CCGGCGGACC GGGCGTGGGC CTGCTTCAGC TCCGGCAGCA CCGGCAGGCC CCGCGCCGTG
GTCCGTACCC GCGCGTCCTG GACGGCGTCG TTCCCCTACC TGGACGACCT CGCCGGGATC
GGCCCGGACG ACGTCGTGCT GGTCCCCGGC CCGCTGGTCT CCTCCCTGTA CGGCTTCGCG
GCCGTGCACG CCCTGGCGAC CGGCGCGACG GCCGTCGTGC CGGGGCGCTG GCCCTCCGCG
TCGCTGGCCG CCCACCTGCG ACGGTCCACC GTGGTCCACC TGGTGCCGCA CCACCTGCCC
GCCGTACTGG AGACCCTGCG CGAGAGCGGG GGCCCGCTGC GGACAGCGGT GATCGGCGGC
GCCGCGCTGC CGGTCGAGTC GCGCGCCCTG GCGGCGGACG CGGGCGTGCG TGTCGTGTCC
TACTACGGCG CCACCGAGCT GTCCTTCGTC GCCGTGGACG CCGACGGCTC GGGGCTGCGG
CCCTTTCCCC GCGTGGAGAT CGAGGTGAGG GTGGCGCCGG GGCAGACGCT GGGAGAGGTG
TGGGTGCGCT CGCCCTGGCT GTCGGAGGGC TACCTGGCCG GCGCGACGGG TCCGCTGCGG
CGCGACGGCG AGGGCTGGAC GACCGTCGGC GACGTGGCGG AGCCGTACCG GCCCGGCGAG
GTCCTGCGGT TGCGCGGCCG CGGTGACGGC GCGATACAGA CCGGTGGCGC CACCGTCGTG
CCCGAGGACG TCGAGGAGGT CCTCAGGAGG CTGCCGGGAG TCGGCGACAT CGTGGTGGTC
GGCTCGCCGC ACCCGCACCT GGGCTCCGTG GTCACCGCGA TCCTCGAGGC GGAGGGCTCC
TCCCCGCCGT CGCGGGCGGC GCTGGAGGCG TTGGCGCGCG GCCGGCTGGA CGCGGCGCAG
CGGCCGCGGC GCTGGTACGC CGTCCAGAGC CTGCCCCGTA CCCCCGCGGG CAAGCCGGCG
CGCGGCCTGC TCGCCGCCCG GCTGGCCGAC GGCGACCCCG GCTTCCGGCG GCTGGCCTGA
 
Protein sequence
MPVAAQVMRH ASDRPHRLAL CGPGGDLSYA GLAAGINGAA RHLSGRGIGR GALAAISLAD 
PVALLTAVLA ADLVGATPLV CDPAWDREQR ARVMDAVPVD TRITVPPPGE EGPPVRSGAS
PADRAWACFS SGSTGRPRAV VRTRASWTAS FPYLDDLAGI GPDDVVLVPG PLVSSLYGFA
AVHALATGAT AVVPGRWPSA SLAAHLRRST VVHLVPHHLP AVLETLRESG GPLRTAVIGG
AALPVESRAL AADAGVRVVS YYGATELSFV AVDADGSGLR PFPRVEIEVR VAPGQTLGEV
WVRSPWLSEG YLAGATGPLR RDGEGWTTVG DVAEPYRPGE VLRLRGRGDG AIQTGGATVV
PEDVEEVLRR LPGVGDIVVV GSPHPHLGSV VTAILEAEGS SPPSRAALEA LARGRLDAAQ
RPRRWYAVQS LPRTPAGKPA RGLLAARLAD GDPGFRRLA