Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5442 |
Symbol | |
ID | 8668736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5965073 |
End bp | 5966734 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | nitrate reductase (beta subunit) |
Protein accession | YP_003340942 |
Protein GI | 271966746 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.210784 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAG TCATGGCCCA ACTCGCCATG GTGATGAACC TGGACAAGTG CATCGGCTGC CACACCTGCT CCGTCACCTG CAAGCAGGCC TGGACCAACC GGGCGGGCAC CGAGTACGTC TGGTTCAACA ACGTCGAGAC CCGCCCCGGG CAGGGCTACC CCCGCACCTA CCAGGACCAG GAGAAATGGA AGGGCGGGTG GGAGTTGAAC CGCCGCGGCC GGCTCCGGCT CAGGGCCGGC GGGCGGCTGC GCAAGCTGTC GTCGATCTTC GCCAACCCGC TCATGCCCTC GATCCAGGAC TACTACGAGC CCTGGACCTA CGACTACGAC AGGCTGTTCT CCGCCCCCAT GCAGGAGGAC ACCCCGGTCG CCCGGCCCAA GTCGCTCATC ACCGGCGAGA ACACCAAGAT CAGCTGGAGT GCGAACTGGG ACGACAACCT GGCCGGCGGG CCGGAGCTGG CTCCCGCCGA CCCGGTGCTG CGCAAGCTGT CGGACCAGGT GAGGCTGGAG TTCGAGCAGG CCTTCATGTT CTACCTGCCG CGCATCTGCG AGCACTGCCT CAACCCCTCG TGCGTGGCCT CCTGCCCGTC GGGGGCGATG TACAAGCGTG CCGAGGACGG CATCGTCCTG GTCGACCAGG ACCGCTGCCG CGGCTGGCGG ATGTGCGTGA CCGGCTGCCC GTACAAGAAG GTCTACTTCA ACCACAAGAC CGGCAAGGCC GAGAAGTGCA CCTTCTGCTA TCCGCGGGTC GAGGTGGGCA TCCCCACCGT CTGCTCGGAG ACATGCGTGG GCCGGCTGCG CTACATCGGG CTGATCCTCT ACGACGCCGA CCGGGTCGCC GAGGCCGCGT CCACTCCCGA CGAGAAGGAC CTCTACGCGG CGCAGCGGAG CGTGCTGCTG GACCCGCACG ACCCCGAGGT GATCGCCGCG GCCCGGGCGG AGGGCATCCC CGAGGACTGG CTGGACGCCG CGCGGCGCTC CCCCGTCCAC AAGCTGATCT CCGATTTCGA GGTCGCGCTG CCGCTGCACC CGGAGTACCG CACCATGCCC ATGGTCTGGT ACATCCCGCC GCTGTCACCG GTCATCGACG TGCTGAGCGG TACCGGGCAC GACGGCGAGG ACGCGGACAA CCTCTTCGGC GCGATCGACG CGCTGCGCAT CCCGATCGGC TACCTGGCCG AGCTGTTCAC CGCCGGAGAT CCCGAGCCGG TACGCGGTGT CCTGCGCAGG CTCGCGGCGA TGCGTTCCTA CATGCGGCGG ATCAACCTCG GGCGGGAGCG GGACGAGTCG ATCGCCACGG CGGTCGGCAT GACCGGTGAA CGGGTCGAGG AGATGTACCG GCTGCTGGCC ATCGCCGCCT ACGGCGAGCG CTACGTCATC CCCAAGGCGC ACGCCGAGCA GGGCGCGCGC CTGGAGGAGT CGGCGAGCGG CTGCAGCCTC GACTACGAGG GCGGCCCCGG CATGGGCGGC CCGTTCGGCG AGGCCTCCGG CGTGCCCGTC CCGGTCGCGG TGGAGAACTT CCACGCGCTG AGGGACCGGC AGACCAGCGG CGCCCTGGTC GACCCCGAGG ACCGGCAGAA CCGGGTCAAT CTCCTCAACT GGGACGGCAA GGGGACGCCC GACGGTCTCT TCCCGGACAG GAACGGCAGG AAGGAACCAT GA
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Protein sequence | MTKVMAQLAM VMNLDKCIGC HTCSVTCKQA WTNRAGTEYV WFNNVETRPG QGYPRTYQDQ EKWKGGWELN RRGRLRLRAG GRLRKLSSIF ANPLMPSIQD YYEPWTYDYD RLFSAPMQED TPVARPKSLI TGENTKISWS ANWDDNLAGG PELAPADPVL RKLSDQVRLE FEQAFMFYLP RICEHCLNPS CVASCPSGAM YKRAEDGIVL VDQDRCRGWR MCVTGCPYKK VYFNHKTGKA EKCTFCYPRV EVGIPTVCSE TCVGRLRYIG LILYDADRVA EAASTPDEKD LYAAQRSVLL DPHDPEVIAA ARAEGIPEDW LDAARRSPVH KLISDFEVAL PLHPEYRTMP MVWYIPPLSP VIDVLSGTGH DGEDADNLFG AIDALRIPIG YLAELFTAGD PEPVRGVLRR LAAMRSYMRR INLGRERDES IATAVGMTGE RVEEMYRLLA IAAYGERYVI PKAHAEQGAR LEESASGCSL DYEGGPGMGG PFGEASGVPV PVAVENFHAL RDRQTSGALV DPEDRQNRVN LLNWDGKGTP DGLFPDRNGR KEP
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