Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5394 |
Symbol | |
ID | 8668688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5911648 |
End bp | 5912838 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | major facilitator transporter |
Protein accession | YP_003340899 |
Protein GI | 271966703 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0326407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.243711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCTCG CCATTTACAT GCTCGGACTG GCGGTCTTCG CTCAGGGGAC GTCCGAGTTC ATGTTGTCCG GCCTCATTCC GGACATCGCA CGCGACATGC ACGTGTCCAT CCCGGCTTCG GGATCACTGA CCTCGGCGTT CGCCGCAGGG ATGATCATCG GAGCGCCGCT GATGGCGATC CTGAGCCTGC GCTGGCCGAG ACGCCGCGCG CTCCTGATCT TCCTGGTCGT TTTCCTGCTC GCCCATGTCC TCGGCGCGGT CACCACCAGT TTCGGGGTAC TGCTGGCCAC GCGGGTCGTC GGCGCGCTGG CCAACGCCGG GTTCCTGGCG GTGGGCCTGG CGGCCGCGAC CGCCATGGTC GGGCCGGACG CCAAGGGCCG CGCCACCTCC GTCCTGCTCG GTGGCGTCAC CATCGCCTGC GTGGCGGGCG TTCCCGCCGG AGCCGTACTC GGTCAGCTGT GGGGATGGCG CTCAGCGTTC TGGGCGGTGG CCATCGTGTC GGTGCCGGCC GTCATCGCGA TCCTGCGGTC GGTACCGGCC ACCGGCCCCG GCTCCGGCTC CGCCGAGACC AGCGCGCGCG GGGAACTGCG TTCGCTGCGC GATCCGCGGC TTCTGGTCAC CCTCCTCCTG GGTGCCCTCG TGAACGGCGC GACGTTCTGC ACGTTCACCT ATCTCGCGCC ACTGGTCACC GACGTCACCG GATTCGGATC CGGATGGGTG CCCGCCATGC TGGCGCTCTT CGGCCTGGGC TCGTTCGTCG GTGTCACCGC CGGTGGCCGG ATGGCCGACA CCCGGCCCAT GCCTCTCCTG GTGGCCGGCG GGGCGGCCCT GCTCGCCGGC TGGATCGTGT TCGCGGTGAC GGCCGGGAAC CCGGTGGCGA CGCTCGTGCT CGTCTTCGTG CAGGGGGCCC TCTCGTTCGC CGTCGGGTCC ACCCTGATCT CGCAGGCGCT CTACGCGGCC ACCGGAGCGC CGACCCTGGC CGGCGGGTTC GCCACGGCCG CGTTCAACGT GGGTGCCGCG GCCGGTCCCT CGTTCGGTGG CATCGCCATC GGCGCGGGGC TCGGTTACCG CTCACCGCTG TGGGTCAGCG CGCTGCTGGT GGCCCTCGCG CTCGCCACCG CAGGCGTGGC CCTCGGGGTT CGGCGCGGGA CGGCCAACCG CCGCGAGGAG GCACCCGCAC CGGCTCGGTA G
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Protein sequence | MPLAIYMLGL AVFAQGTSEF MLSGLIPDIA RDMHVSIPAS GSLTSAFAAG MIIGAPLMAI LSLRWPRRRA LLIFLVVFLL AHVLGAVTTS FGVLLATRVV GALANAGFLA VGLAAATAMV GPDAKGRATS VLLGGVTIAC VAGVPAGAVL GQLWGWRSAF WAVAIVSVPA VIAILRSVPA TGPGSGSAET SARGELRSLR DPRLLVTLLL GALVNGATFC TFTYLAPLVT DVTGFGSGWV PAMLALFGLG SFVGVTAGGR MADTRPMPLL VAGGAALLAG WIVFAVTAGN PVATLVLVFV QGALSFAVGS TLISQALYAA TGAPTLAGGF ATAAFNVGAA AGPSFGGIAI GAGLGYRSPL WVSALLVALA LATAGVALGV RRGTANRREE APAPAR
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