Gene Sros_5394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5394 
Symbol 
ID8668688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5911648 
End bp5912838 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content72% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_003340899 
Protein GI271966703 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0326407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.243711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTCG CCATTTACAT GCTCGGACTG GCGGTCTTCG CTCAGGGGAC GTCCGAGTTC 
ATGTTGTCCG GCCTCATTCC GGACATCGCA CGCGACATGC ACGTGTCCAT CCCGGCTTCG
GGATCACTGA CCTCGGCGTT CGCCGCAGGG ATGATCATCG GAGCGCCGCT GATGGCGATC
CTGAGCCTGC GCTGGCCGAG ACGCCGCGCG CTCCTGATCT TCCTGGTCGT TTTCCTGCTC
GCCCATGTCC TCGGCGCGGT CACCACCAGT TTCGGGGTAC TGCTGGCCAC GCGGGTCGTC
GGCGCGCTGG CCAACGCCGG GTTCCTGGCG GTGGGCCTGG CGGCCGCGAC CGCCATGGTC
GGGCCGGACG CCAAGGGCCG CGCCACCTCC GTCCTGCTCG GTGGCGTCAC CATCGCCTGC
GTGGCGGGCG TTCCCGCCGG AGCCGTACTC GGTCAGCTGT GGGGATGGCG CTCAGCGTTC
TGGGCGGTGG CCATCGTGTC GGTGCCGGCC GTCATCGCGA TCCTGCGGTC GGTACCGGCC
ACCGGCCCCG GCTCCGGCTC CGCCGAGACC AGCGCGCGCG GGGAACTGCG TTCGCTGCGC
GATCCGCGGC TTCTGGTCAC CCTCCTCCTG GGTGCCCTCG TGAACGGCGC GACGTTCTGC
ACGTTCACCT ATCTCGCGCC ACTGGTCACC GACGTCACCG GATTCGGATC CGGATGGGTG
CCCGCCATGC TGGCGCTCTT CGGCCTGGGC TCGTTCGTCG GTGTCACCGC CGGTGGCCGG
ATGGCCGACA CCCGGCCCAT GCCTCTCCTG GTGGCCGGCG GGGCGGCCCT GCTCGCCGGC
TGGATCGTGT TCGCGGTGAC GGCCGGGAAC CCGGTGGCGA CGCTCGTGCT CGTCTTCGTG
CAGGGGGCCC TCTCGTTCGC CGTCGGGTCC ACCCTGATCT CGCAGGCGCT CTACGCGGCC
ACCGGAGCGC CGACCCTGGC CGGCGGGTTC GCCACGGCCG CGTTCAACGT GGGTGCCGCG
GCCGGTCCCT CGTTCGGTGG CATCGCCATC GGCGCGGGGC TCGGTTACCG CTCACCGCTG
TGGGTCAGCG CGCTGCTGGT GGCCCTCGCG CTCGCCACCG CAGGCGTGGC CCTCGGGGTT
CGGCGCGGGA CGGCCAACCG CCGCGAGGAG GCACCCGCAC CGGCTCGGTA G
 
Protein sequence
MPLAIYMLGL AVFAQGTSEF MLSGLIPDIA RDMHVSIPAS GSLTSAFAAG MIIGAPLMAI 
LSLRWPRRRA LLIFLVVFLL AHVLGAVTTS FGVLLATRVV GALANAGFLA VGLAAATAMV
GPDAKGRATS VLLGGVTIAC VAGVPAGAVL GQLWGWRSAF WAVAIVSVPA VIAILRSVPA
TGPGSGSAET SARGELRSLR DPRLLVTLLL GALVNGATFC TFTYLAPLVT DVTGFGSGWV
PAMLALFGLG SFVGVTAGGR MADTRPMPLL VAGGAALLAG WIVFAVTAGN PVATLVLVFV
QGALSFAVGS TLISQALYAA TGAPTLAGGF ATAAFNVGAA AGPSFGGIAI GAGLGYRSPL
WVSALLVALA LATAGVALGV RRGTANRREE APAPAR