Gene Sros_5392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5392 
Symbol 
ID8668686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5909669 
End bp5910610 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340897 
Protein GI271966701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0198899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.449633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA ACACGCTGAC CGACCGCTAC GTACATGAGG TCGTCCGGCG GATCCCGGCC 
GACCAGCGCG ACGACGTCGC CGACGAACTG CGCACCACGA TCGCCGACAC CGTCGACGCG
CGCGACGCTG CCGACCCGGA CTCGGCGGAA CGCGAGGTGC TCACCGAGAT GGGCGACCCG
ATCCGGCTCG CCGCCCGTTA TGCGGACCGG CCGCTCACGT TGATCGGCCC CGAGCTCTAC
CCGACCTACA TCCGGCTGCT GGTGACCCTG CTGTCCGCCG TGCTGCCGGT GGTCACCGCC
GCGCTCGTGG TGGTCGACGT CCTGGACAAC AACGACCTCG GCTCGGCGAT CGGCACCGGC
ATCGGCGCGG CGCTCACCGT CGGCGCCCAG ATGATCGCCT GGCTCACCGT GGTGTTCGCC
CTGGTCGAGC GGTCCCGAAA CCGCAAGGGT GCGTCCGCCG CCTCCGGCAC CTGGACCCCC
GACGACCTGC CCGAGCTCCC CCGCCCGGAC AAGCGCGTCG GGGCGGCCGG CGCCGCCGCG
GTGGGGAACG CGCTGCTGAT CGGGCTGATC GTCTGGCAGC ACATCGCCGA GCCCTACCGC
GCCGACGGGA ACGCCGAGCG GCTGCAGGTG CTCCATCCCG ACCTGTGGTC CGGGTGGATC
TGGCCGATCC TCGCCGGCCT CGCCGGCCTC GTGGCGCTCA ACCTGGTCCG GATCGCCGCG
CGCGGATGGA CCGTCCGGCT GGCCGCCTGG TACGCCCTCG CCGAAGCGGC GTTCGCGCTG
CCACTGGCAT GGATCCTCTA CCGCCGCGTG TTCTTCAGTC CGGAGTTCCT GACGGACTTC
AGCGGGAAGT GGACGGACTC CTTCTACACC GTCACAGCGC TGGGCGTGCT CGTGGTGAGC
GCGAGCGCGG TGGTCAGCCG CTTCCGGGAG GCGCGCAGGT AA
 
Protein sequence
MSTNTLTDRY VHEVVRRIPA DQRDDVADEL RTTIADTVDA RDAADPDSAE REVLTEMGDP 
IRLAARYADR PLTLIGPELY PTYIRLLVTL LSAVLPVVTA ALVVVDVLDN NDLGSAIGTG
IGAALTVGAQ MIAWLTVVFA LVERSRNRKG ASAASGTWTP DDLPELPRPD KRVGAAGAAA
VGNALLIGLI VWQHIAEPYR ADGNAERLQV LHPDLWSGWI WPILAGLAGL VALNLVRIAA
RGWTVRLAAW YALAEAAFAL PLAWILYRRV FFSPEFLTDF SGKWTDSFYT VTALGVLVVS
ASAVVSRFRE ARR