| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5386 |
|---|
| Symbol | |
|---|
| ID | 8668680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5903654 |
|---|
| End bp | 5905288 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_003340891 |
|---|
| Protein GI | 271966695 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.221909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.37846 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACG CCCTGATCGT GGTTTCGAAC CTGTCATTCT CCTGGCCCGA CGACACCCCG
GTGTTCGAGG ACCTCTCATT CACCGTCCCG TCGGGACACA CCGGCCTGGT GGCGCCCAAC
GGTGCCGGCA AGAGCACGCT GCTCAAGCTG ATCGCCGGCG CCCTTCGCCC GGCCGCCGGC
TCGGTCACGG TGGCGGGGGT GCTGGGCTAT CTGCCCCAGA CGCTGCCCCT CGTCGGCGAC
CTGACCGTGG CCGAGGTCCT GGAGATCGCT CCGGTGATCA GGGCGCTGAA CGCCATCGAG
GCCGGAGACG CGAGCGAGGA GCACTTCACG ACGATCGGCA ACGACTGGGA CATCGAGGAG
CGCACCCGTG CCCAGCTGGA CCGGCTCGGC CTCGGGGACG TCTCCCTCAC CCGGCGCCTG
CACACCCTCA GCGGCGGCCA GGTCGTCTCC CTCGGCCTGG CGGCACAGCT GCTGAAGCGG
CCCGACGTCC TGCTGCTCGA CGAACCGACC AACAACCTCG ACCTCGACGC GCGCCACAAG
CTCTACGGCG TGCTCGGGGA CTGGAACGGC TGCCTGCTGC TGGTCAGCCA CGACCGGGCA
CTGCTCGACC GCATGGACCG CATCGCCGAG CTCGACCGGG GCGAGCTCCG GTCCTACGGC
GGGAACTACA CCGAGTACGA GGAGGCCGTG CGCGCCGCGC GGGAGGTCGC CGAGAAGAAC
GTCCGCAACG CCGAGCAGGA GGTCAGGCGG GAGAAGCGGG AGATGCAGCA GGCCCGCGAG
CGGGCCGCGC GCCGGGCCGG CAACGCCGCC CGCAACCTCA AGAGCGCCGG CCTGCCGAAG
ATCTTCGCCG GGACGATGAA GCGGCGTGCC CAGGAATCGG CGGGGAGGTC GAACGAGACG
CACGCCATGC GGGTCAGCGA GGCCAGGGCC AGGCTCGACG AGGCGGGCCG GGCAGTGCGC
GACGAGCAGA AGATATCGCT GGAGCTGCCC GGGACCGGCG TCCCGGCCGG ACGCACGGTC
TTCCTCGGCG AACGGATGCA GGTCCGCTAC GGCGAGCGGG CCCTCTTCTC CGGGGAGGGG
GCGGACCTGG CGATCCGGGG GCCCGAGCGG ATCGCTCTGA CCGGCCCCAA CGGCGCCGGC
AAGTCCACCC TGCTGCGCGT GATCAACGGT GAGCTGGAGC CGGAGGGCGG CGGGACCAGG
CGGGCCGACG GCCGGGTCGC CTACCTGTCC CAACGGCTGG ACCTGCTGGA CCTCGACCGC
ACCGTGGCGG AGAACCTGGC CGCGTTCGCG CCGGGGATGC CGGAGGCGCA GCGGATGAAC
CTGCTCGCAC GCTTCCTGTT CCGGGGCTCC CGCATCCACC TCCCGGTCGG GGTGCTGTCC
GGCGGCGAGC GGCTGCGCGC CACCCTGGCC TGCGTCCTGT GCGCCGAACC GGCGCCCCAG
CTGCTGCTGC TGGACGAACC GACCAACAAC CTCGACCTGG TCAGCGTCGC CCAGCTGGAA
GGCGCCCTGC AGTCATACGA GGGCGCCTTC GTGGTGGTCA GCCACGACGA GCGGTTCCTC
GCCGAGATCG GAGTGGACCG CTGGCTGCGG CTGTCCGAGG GGCGTCTGCT CGAAACGGGC
GCCCCCGGTG CGTGA
|
|---|
| Protein sequence | MSDALIVVSN LSFSWPDDTP VFEDLSFTVP SGHTGLVAPN GAGKSTLLKL IAGALRPAAG
SVTVAGVLGY LPQTLPLVGD LTVAEVLEIA PVIRALNAIE AGDASEEHFT TIGNDWDIEE
RTRAQLDRLG LGDVSLTRRL HTLSGGQVVS LGLAAQLLKR PDVLLLDEPT NNLDLDARHK
LYGVLGDWNG CLLLVSHDRA LLDRMDRIAE LDRGELRSYG GNYTEYEEAV RAAREVAEKN
VRNAEQEVRR EKREMQQARE RAARRAGNAA RNLKSAGLPK IFAGTMKRRA QESAGRSNET
HAMRVSEARA RLDEAGRAVR DEQKISLELP GTGVPAGRTV FLGERMQVRY GERALFSGEG
ADLAIRGPER IALTGPNGAG KSTLLRVING ELEPEGGGTR RADGRVAYLS QRLDLLDLDR
TVAENLAAFA PGMPEAQRMN LLARFLFRGS RIHLPVGVLS GGERLRATLA CVLCAEPAPQ
LLLLDEPTNN LDLVSVAQLE GALQSYEGAF VVVSHDERFL AEIGVDRWLR LSEGRLLETG
APGA
|
|---|
| |