Gene Sros_5385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5385 
Symbol 
ID8668679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5902609 
End bp5903445 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content71% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003340890 
Protein GI271966694 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0167566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.22547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGA GCAGCGAAAA TACGGTCCCA GTGAACGCGT CGGTCATCTC CGGGGACGGA 
ACCGAGATCG CGTTCGAGCG GCTCGGTTCC GGGCCCGCGG TCATCCTCGT GTCCTCGGCA
CTGGCTGACC GCTCCGACGC CCGTAAGCTC GCCGGCCTGC TCGCCCAGCA CTTCACCGTG
ATCAACTACG ACCGGCGGGG CCGGGGCGCC AGCGACGACG CCACCGAGTA CGCGGCCGAA
CGCGAGATCG AGGACATCGC GGCGCTGATC GACCACGCCG GGGGCTCGGC GTCGGTGTTC
GGGAGCTCCT CGGGGGCGGT GCTGGCGTTG CGCGCCGCGG CGGCCGGACT CGACATCGAG
AAACTGGCGC TCTACGAACC GCCGTTCGTG ATCGGCGCCG CCGGCTTCGG CCCGCCCGGG
GACTACGCCC GGCGGCTTGA CGCGCTGCTG GCCGCCGGCC GGCGCGGCGA CGCGGTCAGA
TACTTCATGA CCAGGGTGCA AGGCATGCCC GCGTTCATGG TCACCATGAT GCGGCTGATG
CCGGGCGTGT GGTCGAACCT CAAGGCGCTG GCGCACACGC TGCCCTACGA CGCGGCGGTG
ATGGGCGACA CCCAGCAGGG CAAGCCGCTG GAGGCCGGCC GGTGGTCGGC CGCGAAAGCG
CCGACGCTGG TGCTGACCGG CGGCAAGAGC CCGGCCGGAT TCCACGACGC CGCACGGGCA
CTCGCCCACG TCCTGCCCGA TGCCGAGCAC CGCACACTGC CCGACCTCAA CCACGGCGCC
GTGGTCATGG CTCCCAAGAG GCTCGCGCCC GCTCTCGTGG AATTCCTGCA CGGCTGA
 
Protein sequence
MSMSSENTVP VNASVISGDG TEIAFERLGS GPAVILVSSA LADRSDARKL AGLLAQHFTV 
INYDRRGRGA SDDATEYAAE REIEDIAALI DHAGGSASVF GSSSGAVLAL RAAAAGLDIE
KLALYEPPFV IGAAGFGPPG DYARRLDALL AAGRRGDAVR YFMTRVQGMP AFMVTMMRLM
PGVWSNLKAL AHTLPYDAAV MGDTQQGKPL EAGRWSAAKA PTLVLTGGKS PAGFHDAARA
LAHVLPDAEH RTLPDLNHGA VVMAPKRLAP ALVEFLHG