Gene Sros_5379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5379 
Symbol 
ID8668673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5892827 
End bp5893315 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content69% 
IMG OID 
ProductTranscriptional regulators-like protein 
Protein accessionYP_003340884 
Protein GI271966688 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0410393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0934088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAATA CGGCCGGCGT GCCCGCCGAG GAATACCTGT GCACCAGGAT CCGCCGCGCC 
GAACAGGCCC TGACGGCCCA CCACGAAGCC GTCCTGCGCG CCTACGGGCT GACCATGACC
CAGTACACGG TGCTGCTCGC CCTCTCCCGC GACGACGGCA TGTCCGGCGC CCAACTGGCC
CGTGCCTGCG GCGTCACCCA GCAGAGCATG GCCACGGTCC TCACCGGCAT GCAGGCCAAG
GGCCTCATCG ACCGGCGCTC GTCACCCGTG CACGCCAAGG TCATGATCGC CACCCTCACC
GGCACCGGCC GGCGCCACCT CGACGGGGCC TACCAGGAAG TCAACGTGCT CGAGAAAGCC
TTCCTCGACA GGTTCACCCC GGCCGAGCAC GGGCAGTTCT GCGACCTCCT CGACCGAGCC
ACCGAGACTC TGATCGAACA GACGCCCCGG CCCGCCAAGC CGACATCCCA TCGCCCCCAG
CCGACGTGA
 
Protein sequence
MTNTAGVPAE EYLCTRIRRA EQALTAHHEA VLRAYGLTMT QYTVLLALSR DDGMSGAQLA 
RACGVTQQSM ATVLTGMQAK GLIDRRSSPV HAKVMIATLT GTGRRHLDGA YQEVNVLEKA
FLDRFTPAEH GQFCDLLDRA TETLIEQTPR PAKPTSHRPQ PT