Gene Sros_5375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5375 
Symbol 
ID8668669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5888919 
End bp5889581 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340880 
Protein GI271966684 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0298613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTCT TGAGGCGGAC GGTCCGAGTC GCCGTACTCA CTCTTTTGGT CATCCCGATC 
ACCGCTGTCA CCGCTACCCC ACAGGCGGCA GCCGACCCGC GCAAGCGGTC ACAGGCCGAC
GCCGGGACGC TGGCCCGCCA CAGGCTGGCC CAGCTGAAAG TCGCCAGGCC ACTGTCGATC
CGCGGTTACA GCCACCGGCG GTTCCAGCCC CGATGGGCGC ACCACAAGGG CAGGTGCGAC
GCGCGGGAGG TGGTCCTGGC CCGCGACGGG CGACGCGTGC GCAGGAATGC GGCCTGCCAC
CCGGTCAAGG GCGTCTGGTA CAGCCCGTAC GACGGCAAGT GGCTGAAAAG CGAGAAGCAG
GTCGACGTCG ATCATGTCGT GCCGCTGGCG TACGCCTGGC GCTCCGGCGC CGGCAAATGG
AGCCAGGCTC GGCGGCGCGC CTTCGCCAAC GACCTCACCC GCCCCGAGCT GATAGCGGTC
AGCCACTCCG TCAACATCGC CAAGGGCGGC CAGGGGCCGC AGAGCTGGCG TCCGCCGCGC
CGTAGCTACT GGTGCCGCTA CGCGACCTCA TGGATCACCG TGAAGTCTCA CTACCGGCTC
TCCGTGACCC GGCGGGAGAA GGTGGCCTTG CTCAACATGC TCCGCACCTG CCGAGGACGA
TGA
 
Protein sequence
MIFLRRTVRV AVLTLLVIPI TAVTATPQAA ADPRKRSQAD AGTLARHRLA QLKVARPLSI 
RGYSHRRFQP RWAHHKGRCD AREVVLARDG RRVRRNAACH PVKGVWYSPY DGKWLKSEKQ
VDVDHVVPLA YAWRSGAGKW SQARRRAFAN DLTRPELIAV SHSVNIAKGG QGPQSWRPPR
RSYWCRYATS WITVKSHYRL SVTRREKVAL LNMLRTCRGR