Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5375 |
Symbol | |
ID | 8668669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5888919 |
End bp | 5889581 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003340880 |
Protein GI | 271966684 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0298613 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCTTCT TGAGGCGGAC GGTCCGAGTC GCCGTACTCA CTCTTTTGGT CATCCCGATC ACCGCTGTCA CCGCTACCCC ACAGGCGGCA GCCGACCCGC GCAAGCGGTC ACAGGCCGAC GCCGGGACGC TGGCCCGCCA CAGGCTGGCC CAGCTGAAAG TCGCCAGGCC ACTGTCGATC CGCGGTTACA GCCACCGGCG GTTCCAGCCC CGATGGGCGC ACCACAAGGG CAGGTGCGAC GCGCGGGAGG TGGTCCTGGC CCGCGACGGG CGACGCGTGC GCAGGAATGC GGCCTGCCAC CCGGTCAAGG GCGTCTGGTA CAGCCCGTAC GACGGCAAGT GGCTGAAAAG CGAGAAGCAG GTCGACGTCG ATCATGTCGT GCCGCTGGCG TACGCCTGGC GCTCCGGCGC CGGCAAATGG AGCCAGGCTC GGCGGCGCGC CTTCGCCAAC GACCTCACCC GCCCCGAGCT GATAGCGGTC AGCCACTCCG TCAACATCGC CAAGGGCGGC CAGGGGCCGC AGAGCTGGCG TCCGCCGCGC CGTAGCTACT GGTGCCGCTA CGCGACCTCA TGGATCACCG TGAAGTCTCA CTACCGGCTC TCCGTGACCC GGCGGGAGAA GGTGGCCTTG CTCAACATGC TCCGCACCTG CCGAGGACGA TGA
|
Protein sequence | MIFLRRTVRV AVLTLLVIPI TAVTATPQAA ADPRKRSQAD AGTLARHRLA QLKVARPLSI RGYSHRRFQP RWAHHKGRCD AREVVLARDG RRVRRNAACH PVKGVWYSPY DGKWLKSEKQ VDVDHVVPLA YAWRSGAGKW SQARRRAFAN DLTRPELIAV SHSVNIAKGG QGPQSWRPPR RSYWCRYATS WITVKSHYRL SVTRREKVAL LNMLRTCRGR
|
| |