Gene Sros_5358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5358 
Symbol 
ID8668652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5870552 
End bp5871157 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative transcriptional regulator, XRE family 
Protein accessionYP_003340864 
Protein GI271966668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.406538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.655587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACG ACCTCGACCA AGCACTCGGC GCGGTCGGAC CCCGACTGCG CACGCTGCGC 
CGGCAGCGCG ATACCACGCT GGCCGATCTG TCGGCGACGA CCGGCATCTC GGTGAGCACC
CTGTCACGGC TGGAGTCCGG CGCCCGCCGG CCGACCCTCG AACTCCTGCT CCCCCTGGCC
AGAGCCCACG GCGTCACGCT CGACGAACTC GTCGACGCCC CACCCACCGG TGACCCGCGC
ATCCACCTGC GCCCGGTCAC CCGCCACGGC ATGATCATGC TGCCCCTGAC CCGCAGAACC
GGCGGCATCC AGGCCTACAA GCTCGTGATC CCGGCCGGCA GCCGCCGGAG GGAGCCCGAT
CCGCAGACCC ACGAGGGCTA CGAATGGCTG TATGTCCTCA ACGGACGGCT CCAGCTCGTC
CTCGGTGAAC ACGATCTGGT GCTCTCCCCC GGCGAAGCTG CCGAGTTCGA CACCCGCGTA
CCGCACTGGT TCGGCGCCGC CGACGGCGAA CCGGTCGAGT TCCTCAGCCT GTTCGGCAAG
CAGGGGGAAC GCGCGCACCT GCGCGCCCGG CCCACGGCGA AACACCCGCC CGGACAACCC
GACTAG
 
Protein sequence
MDNDLDQALG AVGPRLRTLR RQRDTTLADL SATTGISVST LSRLESGARR PTLELLLPLA 
RAHGVTLDEL VDAPPTGDPR IHLRPVTRHG MIMLPLTRRT GGIQAYKLVI PAGSRRREPD
PQTHEGYEWL YVLNGRLQLV LGEHDLVLSP GEAAEFDTRV PHWFGAADGE PVEFLSLFGK
QGERAHLRAR PTAKHPPGQP D