Gene Sros_5345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5345 
Symbol 
ID8668639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5860190 
End bp5860678 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340852 
Protein GI271966656 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.598505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGAGC CGGTGCTCGG CGACGTCGCG GCGCAGCGCG AACGGCTGGC GGAAGGGCTC 
AGGGCCTACG GCGCGAGCTT CACCGAACTG GGCCGTCGCT TCGCAGCCCG GTTGGGGGTG
CACTCCACCG ACGCCTTCGC CCTGCTGGAG ATCGCCTCCG CCGCGGAGAG CGGCGTCCCG
CTCTCCCCCG CCCTCCTCAG CAGACGCATC TCACTGTCCT CGGGGGCCAT GACCGCGCTG
CTGAACCGCC TCGAACAGGC CGGGTACGTC ACCCGCACCC GCGGACACAC CGACCGGCGG
ATCGTCACCC TGCACAGCAG CGCGCAGGTC AAGGAGCTCG CCGAGGAGTT CTTCGCCCCC
GTCAACGAAC GCCAGGACAC CATCTTGGCC CAGTACCCGC CCGAGCTGCT TCACCAGCTC
GAGACCGTCC TGGCCCAACT GTGTTCCACC CTGGACGCCC AGCTCGCACC GCGACAGGAG
GACATCTGA
 
Protein sequence
MEEPVLGDVA AQRERLAEGL RAYGASFTEL GRRFAARLGV HSTDAFALLE IASAAESGVP 
LSPALLSRRI SLSSGAMTAL LNRLEQAGYV TRTRGHTDRR IVTLHSSAQV KELAEEFFAP
VNERQDTILA QYPPELLHQL ETVLAQLCST LDAQLAPRQE DI