| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5328 |
|---|
| Symbol | |
|---|
| ID | 8668622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5842870 |
|---|
| End bp | 5843844 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | transcriptional activator FtrA |
|---|
| Protein accession | YP_003340835 |
|---|
| Protein GI | 271966639 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.417039 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTTC ACCGGGTGGT CGCACTGGTC CTACCGCCGC AGTCCACGTT CGAGCTCGCG
TGCGCCGCCG AGGTCTTCGG TGTGAGCCGT CCCGGCCTGC CCGCCCGTTA CGACTTCGAG
GTGTGCGCGG AGCGCCGGGG CTCCGTGCCG ACGCTGGCGG GCTACCACAT GGCGGTGGAT
CAGGGACTGT CGGCACTCGC GGCCGCGGAC ACGGTGGTGA TCCCCGGCTG GCAGCACTCC
GGACAGCCCG CCCCGCCCGC CGTGATCGAC GCGCTACGGC AGGCCCACCG GCGAGGCGCC
CGCGTCGTCG CGATCTGCTC GGGCGCCTTC CTGCTGGCCC AGGCGGGGTT ACTGGACCAC
CGCCGGGCGA CCACGCACTG GCGGATGGCG GCCGAGCTGG CGGACCGGTT CCCCGGCGTC
CAGGTCGAAC CCGACACGCT GTACATCGAC CTGGGCGATG TCGCCACCAG CGCCGGCAGC
GCCGCGGGCA TCGACCTGTG CCTGCACCTG GTCCGCGCCG ACCACGGCGC CGCCTACGCC
GCGCAGATCG CCCGGCACAT GATCATGCCC CCGCACCGCG AGGGCGGGCA GCTCCAGTAC
GCCACGCATG CCGCCCCCGA CCGCCTGCCC GACTCCCTGG CCCCCGTTCT CGACTGGGCC
GCCGAACGGC TGCACGAGCC CCTCACCGTC GACGACCTCG CCGCGCGGGC CAGGGTCTCC
ACGCGGACAC TCGCCCGCAG ATTCGCCGAC CAACTCGGCG TCAGCCCCGG CAGATGGTTG
CTCCGCCAAC GCGTCACGGC GGCTCAAGCC CTCCTGGAGG AGTCGGATCT CCCGGTGGAG
ACGATCGCGA CCAGAGTCGG TCTGTCCTCG GCCACCAACC TCCGCAGGCA CTTCCACTCC
ATGGTGCACA CCACACCCGC CACTTACCGG CGGTCCTTCG GCCGTCACAC CAGTGGCTCG
CAGCCGAGCT CCTGA
|
|---|
| Protein sequence | MSVHRVVALV LPPQSTFELA CAAEVFGVSR PGLPARYDFE VCAERRGSVP TLAGYHMAVD
QGLSALAAAD TVVIPGWQHS GQPAPPAVID ALRQAHRRGA RVVAICSGAF LLAQAGLLDH
RRATTHWRMA AELADRFPGV QVEPDTLYID LGDVATSAGS AAGIDLCLHL VRADHGAAYA
AQIARHMIMP PHREGGQLQY ATHAAPDRLP DSLAPVLDWA AERLHEPLTV DDLAARARVS
TRTLARRFAD QLGVSPGRWL LRQRVTAAQA LLEESDLPVE TIATRVGLSS ATNLRRHFHS
MVHTTPATYR RSFGRHTSGS QPSS
|
|---|
| |