Gene Sros_5327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5327 
Symbol 
ID8668621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5841317 
End bp5842639 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content73% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003340834 
Protein GI271966638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.620258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACC TGAACCACCT GCAGAGCCTG CTCGACAGCG AGGCGAGATC CCTCCACGTC 
CCCGGTGCGG CCGTCGGCGT GCTGCTCGAC GGCGCGGAGC ACATCCTCAC CACCGGCGTC
ACCAGCGTCG ACGCGCCGGC CCCCGTTACG GGCGACACGC TGTTCCAGAT CGGGTCGACC
ACCAAGACGC TCACGGCGAC GACGATCATG CACCTCGTCG AGCGCGGCCG CCTCGACCTG
GACGGGCGCG TGCGGCGGTA TCTGCCCGGC TTCCGGCTCG CCGACGAGCG GGCCGCGGCC
GAGCTGACCA TCCGGCATCT GCTCACCCAC ACCGGCGGAT TCCTCGGTGA CATCGACGAC
GGCGAGAGCT GGGACACCTC GGCGCTGGCC GACTCGATCG GCGCCTACGA CCAGCTGCCC
CAGCTCTTCC CGCCCGGCGC GCTCGCCTCC TACAACAACG CCGGGTTCAG GCTGCTCGGC
AGGATCGTCG AGGTCGTGTG CGGCGAGCCG TACGAGAACG CGGTCAGGCG CGTCGTGCTC
GAACCCCTGG GCATGAGCTC CAGCTTCTTC TTCCCCTGGG AGGCCGCGAC GCGACCGCAC
GCCGTCGGGC ACGCCGTACG GGAGGAAGGC CCGCAGGTCG CGCACACGTG GGGGCTGTTC
CGCGAGGGCA TGGCCGAGGG CGGGCTGGTG TCGTCGGTGC GCGACCAGCT GCGCTACGCC
GCCTTCCACC TGGGCGCGGG CGGAGAGGTG CCGGTCGCCG CCGCCACCAG GGAGCTGATG
CAGGCGGAGC ACGTCCGGGT CGGGGTGCCG TGGACCGGCA TCGGGCTGCC GTGGCTGCTG
GAGGAGCAGG CGGGCGTGCG GCTGGTCACG CATGGCGGCA ACATCGGCAA CCTGCAGCTG
TCCACGTTCG TGCTGGCGCC CGAGCGCGGC TTCGCCGTCA CCACGCTCAC CAACTCCGCG
TCCGGCAAGG TGCTGGGCAA GCTGGTGACC GACTGGTGCC TGGAGCACCT GCTCGACGCC
AAGCCGCAGG CCGTACGGCT GGCGCTGCGC GGACCCGCGC CGGAGTACGC GGGCAGCTAC
GACGCGGGGC AGTGGACCTT CGAGGTCGAC GAGGGGCTGA CGGCGCGATT CGTGCTGCGC
CCCGAACTGG TGGCCGCGGG GGTGGAGGGC ATGCCCGACA TGCCGCTCGC GCTGGTCGAG
GGCTGTGACG ACGTGGCGAT CGCCGCCGAC CCGCGGCAGG CCGTCGGCCG CTTCCTGCGA
GACGACGCGG GTGAGGTCGC CTTCCTGCAC CTGGGCGGCA GGGCGGCCCG GCGGATCCGC
TGA
 
Protein sequence
MADLNHLQSL LDSEARSLHV PGAAVGVLLD GAEHILTTGV TSVDAPAPVT GDTLFQIGST 
TKTLTATTIM HLVERGRLDL DGRVRRYLPG FRLADERAAA ELTIRHLLTH TGGFLGDIDD
GESWDTSALA DSIGAYDQLP QLFPPGALAS YNNAGFRLLG RIVEVVCGEP YENAVRRVVL
EPLGMSSSFF FPWEAATRPH AVGHAVREEG PQVAHTWGLF REGMAEGGLV SSVRDQLRYA
AFHLGAGGEV PVAAATRELM QAEHVRVGVP WTGIGLPWLL EEQAGVRLVT HGGNIGNLQL
STFVLAPERG FAVTTLTNSA SGKVLGKLVT DWCLEHLLDA KPQAVRLALR GPAPEYAGSY
DAGQWTFEVD EGLTARFVLR PELVAAGVEG MPDMPLALVE GCDDVAIAAD PRQAVGRFLR
DDAGEVAFLH LGGRAARRIR