Gene Sros_5284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5284 
Symbol 
ID8668578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5799955 
End bp5800524 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340796 
Protein GI271966600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.325627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCG CGGGACTGAC TGCGGAACGC CTGACCCGGG CGGCGGCGGA TCTGGCCGAC 
GAGATCGGCT TTCAGAACGT GACCGTCTCG GCGCTCGCGC GCGGATTCGG CGTCAAGCCC
GCTGCCCTGT ACTCGCACGT CAGGGACGCG CGGGAGCTGA GGGTCAGGGT GGCGTTGCTG
GCCCTGGCGG AGCTCGCGGA CGGGGCCGCC TCCGCCCTGG CCGGCCGCGC GGGCAAGGAC
GCGCTGGTGG CCTTCGCGAA CGCCTACAGG GACTACGCGA AAGAGCATCC GGGGAGATAC
GCCGCGATGC AGGTCGAGCT TGACTCGGAG AGGATGGACA CCGGCGCGGC GGGCCGGCAC
GCGGAGATGA CGCGGGCGAT CCTGCGCGGA TACGAGCTGC CGGAGCCCGA CCGGACGGAC
GCGGTACGGA TGCTGCACAG TACGTTCCAC GGGTATGTGA GCCTGGAGAC GGCGGGCGGG
TTCCGCCGCC ATCCCCGCGA GGTGGACGCC TCGTGGTCCA GAACCCTGGA CGCCCTCGAC
GCCGTCCTCA GAAACTGGCC GCCGGCCTGA
 
Protein sequence
MARAGLTAER LTRAAADLAD EIGFQNVTVS ALARGFGVKP AALYSHVRDA RELRVRVALL 
ALAELADGAA SALAGRAGKD ALVAFANAYR DYAKEHPGRY AAMQVELDSE RMDTGAAGRH
AEMTRAILRG YELPEPDRTD AVRMLHSTFH GYVSLETAGG FRRHPREVDA SWSRTLDALD
AVLRNWPPA