Gene Sros_5275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5275 
Symbol 
ID8668569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5793407 
End bp5794018 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340787 
Protein GI271966591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.398681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.15306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTGA CCAGGGCGGA AAGCAAGGCG GCCAACAAGC GCGCGCTGAT CGACGCGGCA 
CGCGAGGTCG TCGGGAAGCA GGGCTCGCAG GCGAAGCTGG AGGACATCGC CGAGCTGGCC
GGCCTGACGA CGGGCGCGAT CTACTCGCTG TTCGGCGGCA AGAACGATCT GATGGTCGCC
ATGGTCGACG ACTACGCCGG CCCGCTCGAC CTGCGGCCGA TCGAGGCCGC CGGCCCCGGC
CTGCCGCTGG AGGAGGTCGT GGCCGAGGTC GCCCGCCGGT TCCACCGGAT GTCGGCGGAT
CCCGGGGCCG CCGGAAAGCT GCTGTTCGAG ACGCGCGTGC TCGACCTCGT GCTCAACGAT
CCGGAGCTGC TGGGCAAGCT CACCGTCTCG GTGAGATCGA CCGAGGTCGA TCTCGCCGAG
CTGTTCACCG GCCGCGAGTA CGACGGGACA CCCGTCACGG GTGGGCAGGC CGTGCGCCTG
GCCCGCGCGC TCAAGGCCCT GCTGTCCGGG CTCGGGCAGA GCGTCGTGCT CGGCGTCCAC
GACGGCTCCG AGGAGTTCTT CGTCGACGTC GCGCACGCCC TGATCACGCC GAAGGTGCTC
GGCCCGGCCT AG
 
Protein sequence
MRLTRAESKA ANKRALIDAA REVVGKQGSQ AKLEDIAELA GLTTGAIYSL FGGKNDLMVA 
MVDDYAGPLD LRPIEAAGPG LPLEEVVAEV ARRFHRMSAD PGAAGKLLFE TRVLDLVLND
PELLGKLTVS VRSTEVDLAE LFTGREYDGT PVTGGQAVRL ARALKALLSG LGQSVVLGVH
DGSEEFFVDV AHALITPKVL GPA