Gene Sros_5274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5274 
Symbol 
ID8668568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5791913 
End bp5793346 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340786 
Protein GI271966590 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.355684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.184804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAT CCCGCTTCGG CATCATCGGC GCGCCGGTGT TGTTCATCGG CGTCTTCCAG 
TTGCTGGAGA TGATGCTGTC GCCGGCGCTC CCGCTCATCC AGCGGGAGCT GGCCGCCTCG
CCCGGCGAGA TCGCGTGGAT CTTCATGGGC GGGCTGATCA GCTCGGCGAT CAGCACCCCG
GTCGTCGGCC GCCTGGCCGA CATGTACGAC AAGCGCACCC TGCTGCTCAC CCTGATGGCG
GTCACCAGTG CCGGAGCCCT CGTCTCCGGC CTGGCACCCA ACGTGCTCGT GCTGATCGCC
GGCCAGGCGG TGCAGGGCAT CTGGCTGGGC ATGCTGCCGC TGACCGTCGG GCTGTTCCGC
GACACCCTCG ACCCCGAGCG GGGCGCCACC GGCAACGGCC TGGTCATCGG CGTCGCCGCC
CTGGCCGGCG CGCTCGGCCT CATCCTCGCC GGGCCGCTCA CCTCGGCACT CGGCTACCGG
TCGCTGTTCT TCCTGGCCCT GGCCGGCGCC CTGGTGGCCG CGCTCTGGGC CTGGCGCGTG
GTGCCCGCCA CGCCCCGCGC GGCCTCCGGG CGCGTCGACT GGGCCGGTGG GCTACTGCTC
GGCGGCGGGC TCGCCCTGCT CATGCTTGGC CTGACCACCT CCTCGAACTG GGGCTGGACG
GCTCCCGCCA CCATCGCCCT GTTCGCGGCC GCGGTGCTGA CGCTGGGCCT GTGGACGATC
GTCGAGCTCC GCACCGGCGA CCCGCTGGTG GACCTGCGGC TGCTGGCCGG GCGCTCCCCG
GCCGGGGTGA CCGCCATGGG GTTCGTGTTC GGCTTCGCCT CCTTCGGGCT GGTGGTCGCG
CTGCCGTTGA TGCTGTCGCT GCCCGCCGAG ACCGGGTACG GCCTGGGCGC CGACACCCTG
TGGATCGGGC TCTACATGTT TCCGCTGGGC ATCGCGGGCA CCCTGGTCGC GCCTCTGGTC
GGGCCGATGA CCAGGCTGCT CGGGCGGCGC GCCGTGCTGG TGCTCGGCAG CGCGCTCGTC
TCGGCCGGCA CCGCCGTGCT CGCCTTCTGG CACTCCTCCC CGTGGCAGGT CGTGGCCGGG
GTGACGGTCA TGGGGCTGGG CGGCTCCATC GGCCTGACCT CCGGGCTGAA CGTCGTGGCC
GCCGACGTGC CCGCCGACCG GGCGGCCGGG GTCAGCGGCG TGGTCTTCGT CGCCAAGAGC
ATCGGCGGCA CCTTCGGGGC GCAGCTCGGC GGCATGGTGC TGGCGGCCGG CACGGTGGCG
GGGGTCCCCG CGGAGAGCAG CTTCGTCAAC ACCTATCTGC TCTCCGCGGT GCTCGGCCTG
CTCGCCGTCG GCGCCGCCCT CGTGATCCCC GCCGCTGTGC GGGACGCCCA AGGCGGGCAC
CCGGTTTCGG CCCCCGCGAC AAAGCCCGCC GCCCTCCAGG GTGACACCCT GTGA
 
Protein sequence
MTRSRFGIIG APVLFIGVFQ LLEMMLSPAL PLIQRELAAS PGEIAWIFMG GLISSAISTP 
VVGRLADMYD KRTLLLTLMA VTSAGALVSG LAPNVLVLIA GQAVQGIWLG MLPLTVGLFR
DTLDPERGAT GNGLVIGVAA LAGALGLILA GPLTSALGYR SLFFLALAGA LVAALWAWRV
VPATPRAASG RVDWAGGLLL GGGLALLMLG LTTSSNWGWT APATIALFAA AVLTLGLWTI
VELRTGDPLV DLRLLAGRSP AGVTAMGFVF GFASFGLVVA LPLMLSLPAE TGYGLGADTL
WIGLYMFPLG IAGTLVAPLV GPMTRLLGRR AVLVLGSALV SAGTAVLAFW HSSPWQVVAG
VTVMGLGGSI GLTSGLNVVA ADVPADRAAG VSGVVFVAKS IGGTFGAQLG GMVLAAGTVA
GVPAESSFVN TYLLSAVLGL LAVGAALVIP AAVRDAQGGH PVSAPATKPA ALQGDTL