Gene Sros_5271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5271 
Symbol 
ID8668565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5788966 
End bp5789760 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340783 
Protein GI271966587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.134392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0594228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGGC CCATGGCCGA ACTCCTCATC TCCGCCCCGG CTGGGGTCAA GATCCGTTCC 
CTTCGCGGCG CGGGGGCGCT GCAACGTGCC GACCGACTGT TGCGCGAGGT CTGGGGGACC
AGACGCGGCG ACGATCCGCC GATACCCCTC GACCTGATGT GCGCGTTCGC CCACACCGGC
GGGTACGTGG GCGGCGCCTT CCTCGACGGG GAGCTCGTCG GGGTGGCGGC GGGGTTCCGG
ACGGCCGACG ACAGCCTGCA CTCGCACGTC GCGGGCGTGG CCGCCAAGGC GCGCGGACGC
GGCGTGGGCC GGGCGCTGAA GGAGCACCAG CGGGCCTGGG CGGCCGGGAA CGGGCTCGTC
GCCGTGTCCT GGACGTTCGA CCCGCTGGTC CGGCGCAACG CCTTCTTCAA CCTGACCCGC
CTGGGTGCCC GGGCAGGCGC CTACCTGCCC GATTTCTACG GGCCGATGAG CGACGGCATC
AACGACGGCG GGCCGTCCGA CCGGCTCTTC GTCACCTGGC CGATCGAGGA GGCCGCTCCC
CCGCCGGTCT CGGAACGCGA CGGGGTGGTC GTGGTGGACG AGACGGGGGC CGTATGGGAC
GCCGAGGGCG CGCCGCTACT GCGGTGCGCG ACCCCGGTGG ACGTCGAGTC GCTGCGTGCG
ACGGACCCGG CGGCGGCCGG GCGGTGGCGG GCGGCGCTGG AGAGCGGGCT CGGCGGCGCG
CTCGACCGGG GATACCGGGT CACCGGGTTC ACCCGCTCCG GCTGGTACCT GCTCGCCCGC
GGGGGTGCCG CGTGA
 
Protein sequence
MLRPMAELLI SAPAGVKIRS LRGAGALQRA DRLLREVWGT RRGDDPPIPL DLMCAFAHTG 
GYVGGAFLDG ELVGVAAGFR TADDSLHSHV AGVAAKARGR GVGRALKEHQ RAWAAGNGLV
AVSWTFDPLV RRNAFFNLTR LGARAGAYLP DFYGPMSDGI NDGGPSDRLF VTWPIEEAAP
PPVSERDGVV VVDETGAVWD AEGAPLLRCA TPVDVESLRA TDPAAAGRWR AALESGLGGA
LDRGYRVTGF TRSGWYLLAR GGAA