Gene Sros_5244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5244 
Symbol 
ID8668538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5756687 
End bp5757700 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content72% 
IMG OID 
ProductDeoR family transcriptional regulator 
Protein accessionYP_003340756 
Protein GI271966560 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.288323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGA CCTCAGCGCG ACTGCTCTCG TTGCTCTCGC TGCTTCAGGC GCGCCGGGAC 
TGGCCGGGGG CGCTGCTGGC CGAGCGGCTG GACATCAGCC CGCGCACTGT GCGCCGTGAT
GTCGACCGCC TGCGCGAGCT CGGCTATCCC ATAGTGGCCT TCAAGGGGCC TGACGGGGGA
TACCGGCTCG ACGCCGGTAC GGAGCTGCCT CCGTTGCTGT TCGACGATGA GCAGGCCGTC
GCTCTGGCCG TCGCACTCCA GACCGCCGCC ACCACCGGTG CCGGGATCGA GGAAGCCGCG
GCGCGTGCGC TGAACACCGT CCGGCAGGTC ATGCCCGCGC GGCTGCGCCA CCGGATCGAC
GCCCTTCAGG TCACCGCTGT CGAGCGGTCC GCGATCCGAC CGGATCCGCA GGTCGACAGC
AGCGTGCTCA TGGCGCTCAG CGCCGCCGTC CACGCCCGAG AGGTGCTGCG CTTCGACTAC
ACCCCCGCAT CCCCGCCGGG GGTGGACGAC AACGGTGTGC AGACCCCGTC GCGCCGGGTG
CAGCCCCATC ATCTCGTCAC CCGGGGTGGG CGCTGGTATC TCGTCGCCTG GGACCTCGAT
CGCGAGGACT GGCGTATCTT CCGTGCCGAC CGGATCATCC CGCGCACTCC CGCAGGGCCT
CGCTTCACCC CGCGCGAGCT GCCCGGAGGT GAGGTGGCAG CTTTCGTGGC CGGCAGGTTC
CGGGGTTCCG ACGGCTCTGG TGACTGGCCC TGCCGCGGCG AGGTGATCCT GGACCTGCCC
GCCGCCGCCG TGTCCCGCCA CACCCGTGAC GGGATCGTCG AGGAGCTCGG CCCGAATCGT
TGCCGGCTCG TTCTGGGCTC ATGGTCATGG CCTGGTCTGG CCGCCGCCAT CGGCGGGTTC
GACGCCGACA TCGAGGTCGT CGGCCCGGCC GAGCTCAGGG ATGCCTTCGC GCGCCTGGCC
CGCCGCTATG CCGACGCGGC GGCCGACGCA CCCGGTACGG TCAGGCGCAC ATGA
 
Protein sequence
MPKTSARLLS LLSLLQARRD WPGALLAERL DISPRTVRRD VDRLRELGYP IVAFKGPDGG 
YRLDAGTELP PLLFDDEQAV ALAVALQTAA TTGAGIEEAA ARALNTVRQV MPARLRHRID
ALQVTAVERS AIRPDPQVDS SVLMALSAAV HAREVLRFDY TPASPPGVDD NGVQTPSRRV
QPHHLVTRGG RWYLVAWDLD REDWRIFRAD RIIPRTPAGP RFTPRELPGG EVAAFVAGRF
RGSDGSGDWP CRGEVILDLP AAAVSRHTRD GIVEELGPNR CRLVLGSWSW PGLAAAIGGF
DADIEVVGPA ELRDAFARLA RRYADAAADA PGTVRRT