Gene Sros_5233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5233 
Symbol 
ID8668527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5749155 
End bp5750204 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content72% 
IMG OID 
ProductAraC family transcriptional regulator 
Protein accessionYP_003340745 
Protein GI271966549 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.896357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.182047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAG ATTCCTCGCA CGACGGTCGC GCGGCGGACC TGCACCGGGT CGTCGTGATC 
GTGGACGAGA ACTCCAACCC CTTCGAGCTC GGCTGTATGA CCGAGGTCTT CGGCCTGCGC
AGGCCCGAGC TTGGCCGCGA TCTCTACGAC TTCCGCCTCT GCTCGCCCGA ACCCCGCACC
CTCATGCGAG ACGCCTTCTT CACCCTGACC GGAGTCGCCG GACTGGAGGC GGCCGAGTCG
GCGGACACGT TGATCGTCCC CAACCGCCCC GACGTCGAGG TGCCGCGCCG CCCGATCGTG
CTGGACGCCG TACGGCGGGC GCACAGGCGC GGTACGCGTC TTGTCGGCTT GTGCAGCGGA
GCTTTCACCC TCGCCGAGGC CGGGGTCCTC GACGGGCGCC GGGCCACCGC CCACTGGCAG
TGGGTGGACG CCTTTCGTGC CCGCTTCCCC TCCGTGCGGC TCGAGGAAGA CGTGCTGTTC
GTCGACGACG GCGACATCCT CACCGCCGCC GGTAGCGCGG CCGCTCTCGA CCTCGGGCTG
CATATCGTCC GCCGCGACCA CGGCGCCGAG GTCGCCAATT CCGTCAGCCG GCGGCTGGTC
TTCACCGCGC ACCGGGACGG CGGGCAGCGG CAGTTCATCG AGCGCCCGGT GCCCGACCTG
CCGGACGAGT CCCTGGCGCC GATCCTGGCA TGGGCGCAGG AGCGGCTGGA CTCACCGCTC
ACGGTCTCCG ACCTCGCGGC GCGCGCCTCG GTCAGCCACG CGACACTGCA CCGGCGCTTC
CGGGCACAGC TGAGCACGAC GCCGCTGGCA TGGCTCACGG GGGAACGGGT CGCCCTGGCC
TGCCGGCTGA TCGAGCGGGG TGAGACACAC CTGGAGGTGG TGGCACGGCA CAGCGGGCTG
GGCACCGCCG CCAACCTGCG CGCGCTGATG CGCCGCCAGA CAGGGCTCAC CCCGTCGGCG
TACCGGCAGC GGTTCGGAGC TGGAGCGGCC CGTCAGCGAC CGCTTCCGCC CCGCCCGGCT
CGCCCTGCCG CACCACTTCC GGCAAGCTAG
 
Protein sequence
MSQDSSHDGR AADLHRVVVI VDENSNPFEL GCMTEVFGLR RPELGRDLYD FRLCSPEPRT 
LMRDAFFTLT GVAGLEAAES ADTLIVPNRP DVEVPRRPIV LDAVRRAHRR GTRLVGLCSG
AFTLAEAGVL DGRRATAHWQ WVDAFRARFP SVRLEEDVLF VDDGDILTAA GSAAALDLGL
HIVRRDHGAE VANSVSRRLV FTAHRDGGQR QFIERPVPDL PDESLAPILA WAQERLDSPL
TVSDLAARAS VSHATLHRRF RAQLSTTPLA WLTGERVALA CRLIERGETH LEVVARHSGL
GTAANLRALM RRQTGLTPSA YRQRFGAGAA RQRPLPPRPA RPAAPLPAS