| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5229 |
|---|
| Symbol | |
|---|
| ID | 8668523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5745324 |
|---|
| End bp | 5746544 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | transporter |
|---|
| Protein accession | YP_003340741 |
|---|
| Protein GI | 271966545 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.276614 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACATCCG CCGACGTCTC GCCACCGGGC ACAGCCCCGG ACGCGAGCCC CTCACCGGTC
CGGGGCTGGC TCGCGGTCCT TGCCGTGACG CTGGGAATCT TCGCCCTGAT GACCTCCGAA
CTGCTGCCCG TCGGGCTGCT CACCCCGATC GGCACCGCAC TGGACGTCTC CGAGGGCACC
GCCGCGCTCA TGGTCACCGT GCCCGGCCTG GTCGCCGCCG TCGCGGCACC GCTGGTCACC
GTGGCCACCG CCAGGATCGA CCGCCGGCTG GTGCTGGCCC TGCTGATCGG TATGGTGGGC
GCGGCCAACC TCGCCTCCGC CTCTGCCACG AGCTTCGCCG TCGTCCTCCT CGCCCGCTTC
CTGATCGGCA TCAGCGTCGG CGGCTTCTGG TCCCTGGCCG GCGCCATGGC CCTGCGTCTG
GTGCCGAAGC ACCATGTCGC GCGCGCCACC GCCGTCGTCT TCGGCGGCGT CGAGACCGCC
TCCGTGCTGG GTGTGCCCGC GGGCACCCTG GTCGGTGACC TCAGCGACTG GCGGACCGCG
TTCGCGGCCG TGGGCGTGCT CGGCCTGATC TCGCTGGCCT GCATGGTCGC CGTCATGCCG
AAGCTGGCAC CGGAGAGCAC GATGACGTTC GCGGACCTGC CGCGGGTGTT CCGGACACAC
CTCGCCGTGC GCGTCGGCAT CGCCATGACC TTCCTGGTCA TCACCGGGCA CTTCACCGCC
TACACGTTCG TGCGGCCCAT CCTCCAGGAC GACGGTGTGG CGGACGGCAT GATCAGTGTG
CTGCTGCTGG TCTTCGGGAT CGCCGGCATC TGCGGCAACT TCATCGCCGG CGCGCTGATC
ACCAAGCGTC TCCGGCAGAC CGTGTGCGGC ATCTCCGTGC TCCTGGCCGC GGCCATGGCC
ACCCTCGCGG TGGCCGACCA CACCACCTTC TCGGCGGCCG CGACCCTCGT CGTCTGGGGC
CTGGGCTACG GCGCCGTCCC GGTCACCTTC CAGACCTGGA TCCTGAACGC CGCACCGACC
GCCACCGAGG CTGCCTCCTC GCTGTACGTG TCGATGTTCA ACCTGTCGAT CGCCCTGGGC
GCCCTTGTCG GCGGCCTGAC GGTCGACGCC GCCTCAACGG TGGGCGTGCT GTGGATCGGT
GGAGTGCTGG CCATCCTGGT GCTGCCGATC GTCGGCGGCA GGCCTCGCGA CATGGCTCCC
CGCCCGGCTC CGCCCGGGTG A
|
|---|
| Protein sequence | MTSADVSPPG TAPDASPSPV RGWLAVLAVT LGIFALMTSE LLPVGLLTPI GTALDVSEGT
AALMVTVPGL VAAVAAPLVT VATARIDRRL VLALLIGMVG AANLASASAT SFAVVLLARF
LIGISVGGFW SLAGAMALRL VPKHHVARAT AVVFGGVETA SVLGVPAGTL VGDLSDWRTA
FAAVGVLGLI SLACMVAVMP KLAPESTMTF ADLPRVFRTH LAVRVGIAMT FLVITGHFTA
YTFVRPILQD DGVADGMISV LLLVFGIAGI CGNFIAGALI TKRLRQTVCG ISVLLAAAMA
TLAVADHTTF SAAATLVVWG LGYGAVPVTF QTWILNAAPT ATEAASSLYV SMFNLSIALG
ALVGGLTVDA ASTVGVLWIG GVLAILVLPI VGGRPRDMAP RPAPPG
|
|---|
| |