Gene Sros_5213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5213 
Symbol 
ID8668507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5730411 
End bp5731250 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative aminoglycoside phosphotransferase protein (antibiotic resistance protein) 
Protein accessionYP_003340728 
Protein GI271966532 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.311333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.607466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC CGAACCGTGA CGCCGGTCAT CCCGATGAAG AGCCGCTGGT GGGTGACGGC 
GTCACACAGG GAATCGTGCG GGTGGGAAAC ACCGTCCGCC GCCCGGTCCG GCCCTTCACC
CTGACGGTTC AGGCCTACCT GGCGCACCTG CGCGCCGCGG GCTTCTCGGC CGCCCCCGTC
CCGCTCGGCC TCGATGACGA GGGCCGCGAG GTCCTCTCGT TCATCCCCGG CGAGGTTCCC
CGTGAGCCCC TCCCGTCCTG GACCGCGGGC GAAGAGGTCC TGATCGAACT CGCACGGCTC
ATCCGCCGCC TGCACGACGC CGCCCAGGAC TGGGTGCCGC CCGCGGACGC GGTATGGGGA
GGACTCCCCG CAGCGCAGAT CACGACCTCA ACCCCCGATG GCCGGCCCCT GCTGGTCAGT
CACCGCGACT ACTGCCCCGG CAATGTCGTC TTCCGCGGCG ACCTGCCCGT CGCTCTCATC
GACTTCGACC TCGCCAAGCC CACCACGAGG GTCGACGATC TCGCCAACGC CCTGTACTGG
TGGGCGCCTC TGCTGCATCC GAAGGACAGG GCGCCCGCCT TCGTCGACCT CGACATCCCT
CACCGTGTCG CGGTGTTCGC CGACGCCTAC GGCATGACCG CGACCCAGCG CCATGCCCTG
GTCCCCGCGG CCACTCGCAT GATCGGCCGT TTTCACGTCA ACATGCGCGC CGCCGCCGGA
GCCGATCCCG TGTTCAGGCG TCTGTGGGAC GGAGGCGTGA AGGATCGGCT CCCGCGCGCT
GAGGCCTGGA TCCACGACGA AGGGCCGGCC ATCACCGCGC GGCTCACCGT CACCGGCTGA
 
Protein sequence
MTDPNRDAGH PDEEPLVGDG VTQGIVRVGN TVRRPVRPFT LTVQAYLAHL RAAGFSAAPV 
PLGLDDEGRE VLSFIPGEVP REPLPSWTAG EEVLIELARL IRRLHDAAQD WVPPADAVWG
GLPAAQITTS TPDGRPLLVS HRDYCPGNVV FRGDLPVALI DFDLAKPTTR VDDLANALYW
WAPLLHPKDR APAFVDLDIP HRVAVFADAY GMTATQRHAL VPAATRMIGR FHVNMRAAAG
ADPVFRRLWD GGVKDRLPRA EAWIHDEGPA ITARLTVTG