Gene Sros_5197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5197 
Symbol 
ID8668491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5713622 
End bp5714449 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content67% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003340714 
Protein GI271966518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.747018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTTACA TCTCTACCCG TGACGACACG CAGATCTTCT TCTACGAGTG GGGCAGCGGC 
CCGCCGGTCC TGTTCATCCA CGGCTGGCCG CTGAACGCCG ACGCCTGGCA CGACCAGATG
AAGGCGGTGG CCGACAACGG CTTCCGCGCG ATCGCGCACG ACCGGCGCGG TCATGGCCGC
TCCGGCCAGC CGTGGGACGG CTACGACTTC GACACCTTCG CCGACGATCT CAACGATCTC
ATCAACGCCC TCGACCTGCG GGACGTCACG CTGGTGGCGC ACTCGATGGG CGGCGGCGAA
CTGGCCCGCT ACATCGGCCG GCACGGCACC TCCCGCCTGG CCAAGGCGGT GCTGCTGTCG
GCGGTGCCGC CGCTCATGCT CAAGACCGCC GACAATCCCG AGGGCACCCC GCAGGAGGTG
TTCGACAAGC TCAAGGCCGG CATCCTCGCC GAGCGCTCGC AGTTCTGGAA GGACACCGCC
GAGGGCTTCT TCGGCGCCAA CCGGCCGGGC AACAAGGTGA CCCAGGGCAA CAAGGACGCC
TTCTGGCTGA TGGCCATGGC CGAGAACATC CAGGCCGGCG TGGCCTGCGT GGACGCCTTT
TCGGCCACCG ACTTCACCGA GGACCTGAAG AAGTTCGACA TCCCCACTCT GATCGTGCAC
GGCGACGACG ACCAGGTGGT GCCGATCGCG GCGTCCGCCG ACAAGTCCTC CAAGATCATC
CCGAACTGCG TCTACAAGAG GTACCAGGCC GGCTCGCACG GCATCGCGCT GGTACCGGGC
GACAAGGAGA AGTTCAACGC CGACCTGCTG GAGTTCCTGC GCAGCTGA
 
Protein sequence
MPYISTRDDT QIFFYEWGSG PPVLFIHGWP LNADAWHDQM KAVADNGFRA IAHDRRGHGR 
SGQPWDGYDF DTFADDLNDL INALDLRDVT LVAHSMGGGE LARYIGRHGT SRLAKAVLLS
AVPPLMLKTA DNPEGTPQEV FDKLKAGILA ERSQFWKDTA EGFFGANRPG NKVTQGNKDA
FWLMAMAENI QAGVACVDAF SATDFTEDLK KFDIPTLIVH GDDDQVVPIA ASADKSSKII
PNCVYKRYQA GSHGIALVPG DKEKFNADLL EFLRS